RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GPR6P46095 362 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ATP5G3P48201 142 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CDC34P49427 236 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RAB5CP51148 216 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RAB7AP51149 207 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RAB13P51153 203 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SPCS3P61009 180 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 HSPE1P61604 102 aaKnown RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RPL23AP62750 156 aaKnown RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 GNB2P62879 340 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 EIF5AP63241 154 aaKnown RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 HBG1P69891 147 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 HBG2P69892 147 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF90Q03938 601 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RTL8BQ17RB0 113 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM41BQ5BJD5 291 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 LRRC10Q5BKY1 277 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 AKR1C8PQ5T2L2 129 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TPTE2P1Q5T6R2 138 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 MIC13Q5XKP0 118 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 PVRIGQ6DKI7 326 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SLC25A24Q6NUK1 477 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 DPPA3Q6W0C5 159 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SPNS3Q6ZMD2 512 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 MIR17HGQ75NE6 70 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SSX8Q7RTT4 187 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SLC16A13Q7RTY0 426 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 H2BFWTQ7Z2G1 175 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 VMO1Q7Z5L0 202 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF429Q86V71 674 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 PDPNQ86YL7 162 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TGIF2LXQ8IUE1 241 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 LINC00518Q8N0U6 118 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 Q8N6K4 173 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 KIR3DL3Q8N743 410 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TCTEX1D1Q8N7M0 179 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 LY6G5BQ8NDX9 201 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 LFNGQ8NES3 379 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR10A7Q8NGE5 316 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR8B3Q8NGG8 313 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR51G1Q8NGK1 321 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR1L8Q8NGR8 309 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR10X1Q8NGY0 326 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR52E5Q8NH55 327 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR9G1Q8NH87 305 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM167AQ8TBQ9 72 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CD300LFQ8TDQ1 290 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RXFP4Q8TDU9 374 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 MBD3L1Q8WWY6 194 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BAQ96A08 127 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ISOC2Q96AB3 205 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 RAB39BQ96DA2 213 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 GNPNAT1Q96EK6 184 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ADTRPQ96IZ2 230 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 FAM167A-AS1Q96KT0 104 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 IGF2BP2-AS1Q96M15 143 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CIB3Q96Q77 187 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR8B2Q96RD0 313 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CLCC1Q96S66 551 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 P2RX4Q99571 388 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 FAM103A1Q9BTL3 118 aaKnown RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 DERL1Q9BUN8 251 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 HINT2Q9BX68 163 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SLC25A2Q9BXI2 301 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 BPESC1Q9GZL8 116 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SIRPDQ9H106 197 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 GAL3ST2Q9H3Q3 398 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 FBXL15Q9H469 300 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF430Q9H8G1 570 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 NRN1Q9NPD7 142 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 NGBQ9NPG2 151 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 NDUFA4L2Q9NRX3 87 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 GNG13Q9P2W3 67 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ONECUT1Q9UBC0 465 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF257Q9Y2Q1 563 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 PRELID3BQ9Y3B1 194 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 WASHC3Q9Y3C0 194 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 YTHDF2Q9Y5A9 579 aaKnown RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 OR51B2Q9Y5P1 312 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 SOX21Q9Y651 276 aaPredicted RBP0.99□□□□□ -2.25
CCDC39-203ENST00000473854 KPTNQ9Y664 436 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 PXMP4Q9Y6I8 212 aa0.99□□□□□ -2.25
CCDC39-203ENST00000473854 MEGF8Q7Z7M0 2845 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 LRP1Q07954 4544 aaKnown RBP0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IGLV11-55A0A075B6I3 123 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3OR16-12A0A075B7B8 117 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TGIF2-C20orf24A0A0A6YYL0 155 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV7-81A0A0B4J1V7 117 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TRAV5A0A0B4J249 113 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TRAV40A0A0B4J280 105 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PPIAL4CA0A0B4J2A2 164 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 PIGBOS1A0A0B4J2F0 54 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3-35A0A0C4DH35 117 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 MDFIC2A0A1B0GVS7 189 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 TCRBV4S1A1TA0A5B7 111 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 FAM231BA6NCW3 169 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 BTBD17A6NE02 478 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 RBFOX3A6NFN3 312 aa0.98□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF727A8MUV8 499 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms