RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 SPCS1Q9Y6A9 102 aa4.84□□□□□ -1.64
HERC4-209ENST00000473533 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 RBAKDNA6NC62 111 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 H3BTX0 84 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 H3BUT2 72 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 DIAPH2-AS1Q14236 149 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
HERC4-209ENST00000473533 LYPD2Q6UXB3 125 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 ERASQ7Z444 233 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 ASCL2Q99929 193 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 CTSZQ9UBR2 303 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 INTS1Q8N201 2190 aaKnown RBP4.83□□□□□ -1.64
HERC4-209ENST00000473533 NOTCH3Q9UM47 2321 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 IGHV3-72A0A0B4J1Y9 119 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 PPIAL4CA0A0B4J2A2 164 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 FABP5P3A8MUU1 101 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 G3V4G9 280 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 K7EIM0 57 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 PPIAL4GP0DN37 164 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 NPBQ8NG41 125 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 ARPC1AQ92747 370 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 SLC50A1Q9BRV3 221 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 DPM3Q9P2X0 92 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 IGHV3-21A0A0B4J1V1 117 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 LOC389332A0A1B0GUA5 103 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 COL8A2P25067 703 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 NMUP48645 174 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 TIMD4Q96H15 378 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 PRR25Q96S07 402 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 CNFNQ9BYD5 112 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 HIF1ANQ9NWT6 349 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 TNCP24821 2201 aa4.83□□□□□ -1.64
HERC4-209ENST00000473533 ZFHX2Q9C0A1 2572 aaPredicted RBP4.82□□□□□ -1.64
HERC4-209ENST00000473533 MRPS12O15235 138 aaKnown RBP4.82□□□□□ -1.64
HERC4-209ENST00000473533 DPM2O94777 84 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 NDUFA3O95167 84 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 IGKCP01834 107 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 CD3EP07766 207 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 EVI2AP22794 236 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 CD24P25063 80 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 UQCRFS1P47985 274 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 SAMD5Q5TGI4 173 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 ASPHD1Q5U4P2 390 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 ADAMTSL5Q6ZMM2 481 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 MYOZ3Q8TDC0 251 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 C21orf62Q9NYP8 219 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 SPENQ96T58 3664 aaKnown RBP4.82□□□□□ -1.64
HERC4-209ENST00000473533 LINC01549A6NIU2 74 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 M0R1W7 72 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 NDUFS7O75251 213 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 PRSS1P07477 247 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 IGLC6P0CF74 106 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 NEGR1Q7Z3B1 354 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 AMN1Q8IY45 258 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 RELNP78509 3460 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 SVEP1Q4LDE5 3571 aa4.82□□□□□ -1.64
HERC4-209ENST00000473533 K7EMI3 77 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 Q8N8P6 123 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 MRPL53Q96EL3 112 aaKnown RBP4.81□□□□□ -1.64
HERC4-209ENST00000473533 PCNX2A6NKB5 2137 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 ABCA4P78363 2273 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 CSMD1Q96PZ7 3565 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 LINC01619G3V211 115 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 LY6LH3BQJ8 138 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 LYRM7Q5U5X0 104 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 ZNF562Q6V9R5 426 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 TTC9CQ8N5M4 171 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 DEFB124Q8NES8 71 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 OR11H6Q8NGC7 330 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 RITA1Q96K30 269 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 ZZEF1O43149 2961 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 IGLV11-55A0A075B6I3 123 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 A0A0G2JNJ9 132 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 F8W1H4 67 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 OVOL3O00110 214 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 CIDEAO60543 219 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 NCR2O95944 276 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 COX7A1P24310 79 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 PLNP26678 52 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 CRIP1P50238 77 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 KLF17Q5JT82 389 aaPredicted RBP4.81□□□□□ -1.64
HERC4-209ENST00000473533 BCL6BQ8N143 479 aaPredicted RBP4.81□□□□□ -1.64
HERC4-209ENST00000473533 ZMAT4Q9H898 229 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 Q9UFV3 132 aa4.81□□□□□ -1.64
HERC4-209ENST00000473533 A0A096LNJ9 63 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 TMEM213A2RRL7 107 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 NCBP2LA6PVI3 153 aaKnown RBP4.8□□□□□ -1.64
HERC4-209ENST00000473533 ZNF785A8K8V0 405 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 PRSS47A8MTI9 375 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 ORM1P02763 201 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 CNTFRP26992 372 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 LEPP41159 167 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 C5orf64Q2M2E5 130 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 C8orf49Q96NF6 230 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 CHAC1Q9BUX1 264 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 TIMM23O14925 209 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 GOSR1O95249 250 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 NPYP01303 97 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 GCSHP23434 173 aa4.8□□□□□ -1.64
HERC4-209ENST00000473533 GFRALQ6UXV0 394 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms