RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 AURKAIP1Q9NWT8 199 aaPredicted RBP11.15□□□□□ -0.62
HIF3A-206ENST00000472815 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 ZFP30Q9Y2G7 519 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 GCGP01275 180 aa11.15□□□□□ -0.63
HIF3A-206ENST00000472815 LTAP01374 205 aa11.15□□□□□ -0.63
HIF3A-206ENST00000472815 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.63
HIF3A-206ENST00000472815 PSG3Q16557 428 aa11.15□□□□□ -0.63
HIF3A-206ENST00000472815 C8orf86Q6ZUL3 223 aa11.15□□□□□ -0.63
HIF3A-206ENST00000472815 WIPF2Q8TF74 440 aaPredicted RBP11.15□□□□□ -0.63
HIF3A-206ENST00000472815 BTF3L4Q96K17 158 aa11.15□□□□□ -0.63
HIF3A-206ENST00000472815 C16orf92Q96LL3 132 aa11.15□□□□□ -0.63
HIF3A-206ENST00000472815 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.63
HIF3A-206ENST00000472815 CUBNO60494 3623 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 K7EN84 100 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 FLI1Q01543 452 aaPredicted RBP11.14□□□□□ -0.63
HIF3A-206ENST00000472815 OR11H1Q8NG94 326 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 OR1N2Q8NGR9 330 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 RNF114Q9Y508 228 aa11.14□□□□□ -0.63
HIF3A-206ENST00000472815 M0R3E3 92 aa11.13□□□□□ -0.63
HIF3A-206ENST00000472815 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
HIF3A-206ENST00000472815 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
HIF3A-206ENST00000472815 Q86TA4 180 aa11.13□□□□□ -0.63
HIF3A-206ENST00000472815 OSTCQ9NRP0 149 aa11.13□□□□□ -0.63
HIF3A-206ENST00000472815 A0A1B0GUS0 222 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 TMEM213A2RRL7 107 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 IGLV2-8P01709 118 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
HIF3A-206ENST00000472815 LCN12Q6JVE5 192 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 PRNTQ86SH4 94 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 TMEM183AQ8IXX5 376 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 FAM24BQ8N5W8 94 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 URGCP-MRPS24S4R325 110 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 COLCA2A8K830 154 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 HAX1O00165 279 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 FAM231DQ6ZW35 169 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 MLXQ9UH92 298 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
HIF3A-206ENST00000472815 ID1P41134 155 aa11.11□□□□□ -0.63
HIF3A-206ENST00000472815 RPL19P84098 196 aaKnown RBP11.11□□□□□ -0.63
HIF3A-206ENST00000472815 OR5I1Q13606 314 aa11.11□□□□□ -0.63
HIF3A-206ENST00000472815 ELOBQ15370 118 aa11.11□□□□□ -0.63
HIF3A-206ENST00000472815 DAZAP1Q96EP5 407 aaKnown RBP11.11□□□□□ -0.63
HIF3A-206ENST00000472815 MLST8Q9BVC4 326 aa11.11□□□□□ -0.63
HIF3A-206ENST00000472815 C2orf70A6NJV1 201 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 CT45A10P0DMU9 189 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 CD28P10747 220 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 CBLN1P23435 193 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 DEFB136Q30KP8 78 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 NHLRC2Q8NBF2 726 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 SGK494Q96LW2 274 aa11.1□□□□□ -0.63
HIF3A-206ENST00000472815 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 SLURP1P55000 103 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 PAFAH1B2P68402 229 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 FOXL1Q12952 345 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 OR9G4Q8NGQ1 327 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
HIF3A-206ENST00000472815 TRBV24-1A0A075B6N3 115 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 TRAV9-1A0A075B6T8 112 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
HIF3A-206ENST00000472815 PROK1P58294 105 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 C18orf65Q6ZTR6 163 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 RNF182Q8N6D2 247 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
HIF3A-206ENST00000472815 NF1P21359 2839 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 IGKV2-40A0A087WW87 121 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-206ENST00000472815 TRAV8-2A0A0B4J237 113 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 OVOL1O14753 267 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
HIF3A-206ENST00000472815 IGKV2D-40P01614 121 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-206ENST00000472815 PFN1P07737 140 aaKnown RBP11.08□□□□□ -0.64
HIF3A-206ENST00000472815 FOLR2P14207 255 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 RAB5AP20339 215 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 TMEM78Q5T7P6 136 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 IGFL4Q6B9Z1 124 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
HIF3A-206ENST00000472815 CITED2Q99967 270 aaPredicted RBP11.08□□□□□ -0.64
HIF3A-206ENST00000472815 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
HIF3A-206ENST00000472815 ZNF705FA8MVS1 300 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-206ENST00000472815 CCL24O00175 119 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 SOCS3O14543 225 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 P01737 135 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 C11orf44Q8N8P7 122 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 V9GYV3 84 aa11.07□□□□□ -0.64
HIF3A-206ENST00000472815 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
HIF3A-206ENST00000472815 A0A1W2PPQ1 181 aa11.06□□□□□ -0.64
HIF3A-206ENST00000472815 A0A1W2PRX2 142 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms