RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 TMEM167BQ9NRX6 74 aa14.69□□□□□ -0.06
SF1-213ENST00000472725 TP53TG1Q9Y2A0 90 aa14.69□□□□□ -0.06
SF1-213ENST00000472725 GDF5OSQ5U4N7 250 aa14.68□□□□□ -0.06
SF1-213ENST00000472725 ARL6IP6Q8N6S5 226 aa14.68□□□□□ -0.06
SF1-213ENST00000472725 OR8A1Q8NGG7 326 aa14.68□□□□□ -0.06
SF1-213ENST00000472725 C1QTNF4Q9BXJ3 329 aa14.68□□□□□ -0.06
SF1-213ENST00000472725 HLA-DMBP28068 263 aa14.67□□□□□ -0.06
SF1-213ENST00000472725 GCHFRP30047 84 aa14.67□□□□□ -0.06
SF1-213ENST00000472725 ZNF726P1Q15940 193 aa14.67□□□□□ -0.06
SF1-213ENST00000472725 FAM74A1Q5RGS3 127 aa14.67□□□□□ -0.06
SF1-213ENST00000472725 TMED6Q8WW62 240 aa14.67□□□□□ -0.06
SF1-213ENST00000472725 F6UB75 175 aa14.66□□□□□ -0.06
SF1-213ENST00000472725 HMGB3O15347 200 aaKnown RBP14.66□□□□□ -0.06
SF1-213ENST00000472725 OR4B1Q8NGF8 309 aa14.66□□□□□ -0.06
SF1-213ENST00000472725 PHYHIPLQ96FC7 376 aa14.66□□□□□ -0.06
SF1-213ENST00000472725 AMBPP02760 352 aa14.65□□□□□ -0.06
SF1-213ENST00000472725 CNN1P51911 297 aaKnown RBP14.65□□□□□ -0.06
SF1-213ENST00000472725 RANP62826 216 aaKnown RBP14.65□□□□□ -0.06
SF1-213ENST00000472725 ICAM4Q14773 271 aa14.65□□□□□ -0.06
SF1-213ENST00000472725 OR10J6PQ8NGY7 276 aa14.65□□□□□ -0.06
SF1-213ENST00000472725 RXFP4Q8TDU9 374 aa14.65□□□□□ -0.06
SF1-213ENST00000472725 Q9H3A6 140 aa14.65□□□□□ -0.06
SF1-213ENST00000472725 OTORQ9NRC9 128 aa14.65□□□□□ -0.06
SF1-213ENST00000472725 MAP1LC3B2A6NCE7 125 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 CA1P00915 261 aaPredicted RBP14.64□□□□□ -0.07
SF1-213ENST00000472725 CSN1S1P47710 185 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 DEFB1P60022 68 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 SSX7Q7RTT5 188 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 EXOC3-AS1Q8N2X6 119 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 MBD3L1Q8WWY6 194 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 MAP1LC3BQ9GZQ8 125 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 PLA2G2EQ9NZK7 142 aa14.64□□□□□ -0.07
SF1-213ENST00000472725 PRKDCP78527 4128 aaKnown RBP14.64□□□□□ -0.07
SF1-213ENST00000472725 ZNF705FA8MVS1 300 aaPredicted RBP14.63□□□□□ -0.07
SF1-213ENST00000472725 EIF3GO75821 320 aaKnown RBP eCLIP14.63□□□□□ -0.07
SF1-213ENST00000472725 SULT1A2P50226 295 aa14.63□□□□□ -0.07
SF1-213ENST00000472725 HIST1H1AQ02539 215 aaPredicted RBP14.63□□□□□ -0.07
SF1-213ENST00000472725 RNF183Q96D59 192 aa14.63□□□□□ -0.07
SF1-213ENST00000472725 RCHY1Q96PM5 261 aa14.63□□□□□ -0.07
SF1-213ENST00000472725 A0A1W2PRE2 83 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 M0R3E3 92 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 SPRY2O43597 315 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 GIG44P09565 113 aaPredicted RBP14.62□□□□□ -0.07
SF1-213ENST00000472725 AMTNQ6UX39 209 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 FAM213BQ8TBF2 198 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 ODF3Q96PU9 254 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 NKX6-2Q9C056 277 aaPredicted RBP14.62□□□□□ -0.07
SF1-213ENST00000472725 U3KQK5 164 aa14.62□□□□□ -0.07
SF1-213ENST00000472725 RBAKDNA6NC62 111 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 NPIPB6E9PJ23 425 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 SLC25A5P05141 298 aaKnown RBP14.61□□□□□ -0.07
SF1-213ENST00000472725 FHITP49789 147 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 NKX2-5P52952 324 aaPredicted RBP14.61□□□□□ -0.07
SF1-213ENST00000472725 CMTM2Q8TAZ6 248 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 LINC00477Q96M19 166 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 OVOL2Q9BRP0 275 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 ARL2-SNX15V9GYD0 113 aa14.61□□□□□ -0.07
SF1-213ENST00000472725 PGPA6NDG6 321 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 PRAC2D3DTV9 90 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 TEX46H3BTG2 121 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 H2AFB1P0C5Y9 115 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 DEFB135Q30KP9 77 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 C9orf47Q6ZRZ4 202 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 PPP1R14DQ9NXH3 145 aa14.6□□□□□ -0.07
SF1-213ENST00000472725 TRAV1-1A0A0B4J248 108 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 SERTM2A0A1B0GWG4 89 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 BOLA2-SMG1P6H3BVE0 249 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 ZNF705DP0CH99 300 aaPredicted RBP14.59□□□□□ -0.07
SF1-213ENST00000472725 ZNF705BP0CI00 300 aaPredicted RBP14.59□□□□□ -0.07
SF1-213ENST00000472725 TSPOP30536 169 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 PPT1P50897 306 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 IQCF2Q8IXL9 164 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 CSNK1G2-AS1Q8NCQ2 148 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 SFT2D1Q8WV19 159 aa14.59□□□□□ -0.07
SF1-213ENST00000472725 TRBV7-9A0A0J9YWB2 115 aa14.58□□□□□ -0.08
SF1-213ENST00000472725 FGF8P55075 233 aaPredicted RBP14.58□□□□□ -0.08
SF1-213ENST00000472725 C5orf17Q8NAS9 161 aa14.58□□□□□ -0.08
SF1-213ENST00000472725 SLC35B3Q9H1N7 401 aa14.58□□□□□ -0.08
SF1-213ENST00000472725 DIRC3C9JPN6 131 aa14.57□□□□□ -0.08
SF1-213ENST00000472725 HBE1P02100 147 aa14.57□□□□□ -0.08
SF1-213ENST00000472725 IGF2BP2-AS1Q96M15 143 aa14.57□□□□□ -0.08
SF1-213ENST00000472725 XCL2Q9UBD3 114 aa14.57□□□□□ -0.08
SF1-213ENST00000472725 NMBP08949 121 aa14.56□□□□□ -0.08
SF1-213ENST00000472725 CDKN1BP46527 198 aa14.56□□□□□ -0.08
SF1-213ENST00000472725 TMEM78Q5T7P6 136 aa14.56□□□□□ -0.08
SF1-213ENST00000472725 TCEAL7Q9BRU2 100 aa14.56□□□□□ -0.08
SF1-213ENST00000472725 TMPRSS5Q9H3S3 457 aa14.56□□□□□ -0.08
SF1-213ENST00000472725 LENEPQ9Y5L5 61 aa14.56□□□□□ -0.08
SF1-213ENST00000472725 ZNF705EA8MWA4 302 aaPredicted RBP14.55□□□□□ -0.08
SF1-213ENST00000472725 LEPP41159 167 aa14.55□□□□□ -0.08
SF1-213ENST00000472725 SUMO1P63165 101 aaKnown RBP14.55□□□□□ -0.08
SF1-213ENST00000472725 RARRES2Q99969 163 aa14.55□□□□□ -0.08
SF1-213ENST00000472725 C20orf144Q9BQM9 153 aa14.55□□□□□ -0.08
SF1-213ENST00000472725 AGPAT4-IT1Q9H0P7 198 aa14.55□□□□□ -0.08
SF1-213ENST00000472725 RETNQ9HD89 108 aa14.55□□□□□ -0.08
SF1-213ENST00000472725 BOLA1Q9Y3E2 137 aa14.55□□□□□ -0.08
SF1-213ENST00000472725 IGKV2-40A0A087WW87 121 aaPredicted RBP14.54□□□□□ -0.08
SF1-213ENST00000472725 FBLL1A6NHQ2 334 aaKnown RBP14.54□□□□□ -0.08
SF1-213ENST00000472725 FAM74A7A6NL05 159 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms