RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 OXA1LQ15070 435 aa12.2□□□□□ -0.46
COMMD3-210ENST00000472610 ZNF767PQ75MW2 155 aa12.2□□□□□ -0.46
COMMD3-210ENST00000472610 BAP18Q8IXM2 172 aa12.2□□□□□ -0.46
COMMD3-210ENST00000472610 NIPSNAP3BQ9BS92 247 aa12.2□□□□□ -0.46
COMMD3-210ENST00000472610 TRAV12-2A0A075B6T6 113 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 IFNA5P01569 189 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 TSPOP30536 169 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 SCGB1C1Q8TD33 95 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
COMMD3-210ENST00000472610 C20orf144Q9BQM9 153 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 MRPL32Q9BYC8 188 aaKnown RBP12.19□□□□□ -0.46
COMMD3-210ENST00000472610 MBD2Q9UBB5 411 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 PRELID1Q9Y255 219 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
COMMD3-210ENST00000472610 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
COMMD3-210ENST00000472610 IGHV4-4A0A075B6R2 117 aa12.18□□□□□ -0.46
COMMD3-210ENST00000472610 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
COMMD3-210ENST00000472610 LINC01587Q99440 93 aa12.18□□□□□ -0.46
COMMD3-210ENST00000472610 PLECQ15149 4684 aaKnown RBP12.18□□□□□ -0.46
COMMD3-210ENST00000472610 ZNF705GA8MUZ8 300 aaPredicted RBP12.17□□□□□ -0.46
COMMD3-210ENST00000472610 PRAC2D3DTV9 90 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 PYYP10082 97 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 MIR17HGQ75NE6 70 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 SLC25A2Q9BXI2 301 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
COMMD3-210ENST00000472610 MED28Q9H204 178 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 OR51M1Q9H341 326 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 AAMDCQ9H7C9 122 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 DNAH1Q9P2D7 4330 aa12.17□□□□□ -0.46
COMMD3-210ENST00000472610 NPIPB6E9PJ23 425 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 NBEAP1P0C6P0 100 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 PRB4P10163 310 aaPredicted RBP12.16□□□□□ -0.46
COMMD3-210ENST00000472610 TAS2R60P59551 318 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 BLNKQ8WV28 456 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 FAM210BQ96KR6 192 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 FAM167A-AS1Q96KT0 104 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 ODF3Q96PU9 254 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 SMIM3Q9BZL3 60 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 FUT9Q9Y231 359 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 ALMS1Q8TCU4 4167 aa12.16□□□□□ -0.46
COMMD3-210ENST00000472610 LYRM9A8MSI8 78 aa12.15□□□□□ -0.46
COMMD3-210ENST00000472610 NDUFB4O95168 129 aa12.15□□□□□ -0.46
COMMD3-210ENST00000472610 LEPP41159 167 aa12.15□□□□□ -0.46
COMMD3-210ENST00000472610 DAD1P61803 113 aa12.15□□□□□ -0.46
COMMD3-210ENST00000472610 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
COMMD3-210ENST00000472610 NDUFAF3Q9BU61 184 aa12.15□□□□□ -0.46
COMMD3-210ENST00000472610 H7BYZ3 331 aa12.14□□□□□ -0.47
COMMD3-210ENST00000472610 ZNF493Q6ZR52 646 aa12.14□□□□□ -0.47
COMMD3-210ENST00000472610 ASB13Q8WXK3 278 aa12.14□□□□□ -0.47
COMMD3-210ENST00000472610 LINC00477Q96M19 166 aa12.14□□□□□ -0.47
COMMD3-210ENST00000472610 PAXXQ9BUH6 204 aa12.14□□□□□ -0.47
COMMD3-210ENST00000472610 M0R3E3 92 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 PRM2P04554 102 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 CT45A10P0DMU9 189 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 AZU1P20160 251 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 FCN2Q15485 313 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 RNF141Q8WVD5 230 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 C16orf74Q96GX8 76 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
COMMD3-210ENST00000472610 OR7C2O60412 319 aa12.12□□□□□ -0.47
COMMD3-210ENST00000472610 HTN1P15515 57 aa12.12□□□□□ -0.47
COMMD3-210ENST00000472610 TAS2R45P59539 299 aa12.12□□□□□ -0.47
COMMD3-210ENST00000472610 ICAM4Q14773 271 aa12.12□□□□□ -0.47
COMMD3-210ENST00000472610 CCDC28AQ8IWP9 274 aa12.12□□□□□ -0.47
COMMD3-210ENST00000472610 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
COMMD3-210ENST00000472610 OR10J4P0C629 311 aa12.11□□□□□ -0.47
COMMD3-210ENST00000472610 ACOT6Q3I5F7 207 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-210ENST00000472610 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
COMMD3-210ENST00000472610 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
COMMD3-210ENST00000472610 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
COMMD3-210ENST00000472610 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
COMMD3-210ENST00000472610 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
COMMD3-210ENST00000472610 WFDC1Q9HC57 220 aa12.11□□□□□ -0.47
COMMD3-210ENST00000472610 TIMM8BQ9Y5J9 83 aaPredicted RBP12.11□□□□□ -0.47
COMMD3-210ENST00000472610 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 SLC25A5P05141 298 aaKnown RBP12.1□□□□□ -0.47
COMMD3-210ENST00000472610 GIPP09681 153 aaPredicted RBP12.1□□□□□ -0.47
COMMD3-210ENST00000472610 P0DMU3 169 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 FAM231AP0DMU4 169 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 FAM231CP0DMU5 169 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 ZNF266Q14584 549 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 KIR3DS1Q14943 382 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 C9orf47Q6ZRZ4 202 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 AQP10Q96PS8 301 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 AGPAT4-IT1Q9H0P7 198 aa12.1□□□□□ -0.47
COMMD3-210ENST00000472610 HYDINQ4G0P3 5121 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 J3KRW8 73 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 HTN3P15516 51 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 M6PRP20645 277 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 ERCC8Q13216 396 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 RGS21Q2M5E4 152 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 TMEM78Q5T7P6 136 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 FAM122CQ6P4D5 195 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
COMMD3-210ENST00000472610 PYGO2Q9BRQ0 406 aa12.09□□□□□ -0.47
COMMD3-210ENST00000472610 TRAV12-3A0A0B4J271 114 aa12.08□□□□□ -0.48
COMMD3-210ENST00000472610 A0A1W2PPV4 95 aa12.08□□□□□ -0.48
COMMD3-210ENST00000472610 NMBP08949 121 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms