RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
CCM2-205ENST00000472223 PPP1R14DQ9NXH3 145 aa12.55□□□□□ -0.4
CCM2-205ENST00000472223 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 PAGE4O60829 102 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 HLA-DMBP28068 263 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 ACTL10Q5JWF8 245 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 DEFB125Q8N687 156 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 ARL6IP6Q8N6S5 226 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 C20orf173Q96LM9 149 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 TXNDC17Q9BRA2 123 aa12.54□□□□□ -0.4
CCM2-205ENST00000472223 FAM74A7A6NL05 159 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 PMS2P11Q13670 270 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 Q8N1Y9 231 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 C5orf17Q8NAS9 161 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 TCEAL7Q9BRU2 100 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 SAV1Q9H4B6 383 aaPredicted RBP12.53□□□□□ -0.4
CCM2-205ENST00000472223 SRD5A3Q9H8P0 318 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
CCM2-205ENST00000472223 RPH3ALQ9UNE2 315 aa12.53□□□□□ -0.4
CCM2-205ENST00000472223 SERTM2A0A1B0GWG4 89 aa12.52□□□□□ -0.41
CCM2-205ENST00000472223 ZNF705FA8MVS1 300 aaPredicted RBP12.52□□□□□ -0.41
CCM2-205ENST00000472223 NUTF2P61970 127 aaKnown RBP12.52□□□□□ -0.41
CCM2-205ENST00000472223 CCL20P78556 96 aa12.52□□□□□ -0.41
CCM2-205ENST00000472223 HIST1H1AQ02539 215 aaPredicted RBP12.52□□□□□ -0.41
CCM2-205ENST00000472223 DEFB121Q5J5C9 76 aa12.52□□□□□ -0.41
CCM2-205ENST00000472223 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.41
CCM2-205ENST00000472223 OR8A1Q8NGG7 326 aa12.52□□□□□ -0.41
CCM2-205ENST00000472223 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
CCM2-205ENST00000472223 DNHD1Q96M86 4753 aa12.52□□□□□ -0.41
CCM2-205ENST00000472223 KNCNA6PVL3 124 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 C11orf94C9JXX5 98 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 M0R3E3 92 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 HAGHQ16775 308 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 LYPD6BQ8NI32 183 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 HIST1H2BAQ96A08 127 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 EIF5A2Q9GZV4 153 aaKnown RBP12.51□□□□□ -0.41
CCM2-205ENST00000472223 C19orf73Q9NVV2 129 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 EPDR1Q9UM22 224 aa12.51□□□□□ -0.41
CCM2-205ENST00000472223 A0A0J9YX75 114 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 BCL2P10415 239 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 IFITM2Q01629 132 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 TMEM78Q5T7P6 136 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 PCNPQ8WW12 178 aaKnown RBP12.5□□□□□ -0.41
CCM2-205ENST00000472223 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
CCM2-205ENST00000472223 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
CCM2-205ENST00000472223 RBAKDNA6NC62 111 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 RBFOX3A6NFN3 312 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 FBLL1A6NHQ2 334 aaKnown RBP12.49□□□□□ -0.41
CCM2-205ENST00000472223 GGTLC3B5MD39 225 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 F6UB75 175 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
CCM2-205ENST00000472223 NMBP08949 121 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 IGHV4-30-4P0DP06 118 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 ZNF124Q15973 351 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 CLLU1Q5K131 121 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 LINC00477Q96M19 166 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 ATG101Q9BSB4 218 aa12.49□□□□□ -0.41
CCM2-205ENST00000472223 H3BMM0 161 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 PDE6DO43924 150 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 TCRAP04437 139 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 RPL35AP18077 110 aaKnown RBP12.48□□□□□ -0.41
CCM2-205ENST00000472223 CNN1P51911 297 aaKnown RBP12.48□□□□□ -0.41
CCM2-205ENST00000472223 APOC4P55056 127 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 MEF2BQ02080 365 aaPredicted RBP12.48□□□□□ -0.41
CCM2-205ENST00000472223 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
CCM2-205ENST00000472223 GOLT1AQ6ZVE7 132 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 CYB561D1Q8N8Q1 229 aa12.48□□□□□ -0.41
CCM2-205ENST00000472223 A8MZ25 164 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 PRAC2D3DTV9 90 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 PEX7O00628 323 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 ZNF705DP0CH99 300 aaPredicted RBP12.47□□□□□ -0.41
CCM2-205ENST00000472223 ZNF705BP0CI00 300 aaPredicted RBP12.47□□□□□ -0.41
CCM2-205ENST00000472223 TSPOP30536 169 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 ATP5G3P48201 142 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 UBE2G1P62253 170 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 GNG5P63218 68 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 GDF5OSQ5U4N7 250 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 MRAPQ8TCY5 172 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 NDFIP1Q9BT67 221 aa12.47□□□□□ -0.41
CCM2-205ENST00000472223 NOTCH1P46531 2555 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 IGKV2-40A0A087WW87 121 aaPredicted RBP12.46□□□□□ -0.41
CCM2-205ENST00000472223 LOC102723971A0A1B0GUV8 181 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 IGKV2D-40P01614 121 aaPredicted RBP12.46□□□□□ -0.41
CCM2-205ENST00000472223 S100A9P06702 114 aaKnown RBP12.46□□□□□ -0.41
CCM2-205ENST00000472223 DEFB1P60022 68 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 PEA15Q15121 130 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 C9orf47Q6ZRZ4 202 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 FAM210AQ96ND0 272 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.41
CCM2-205ENST00000472223 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
CCM2-205ENST00000472223 K7EIL1 84 aa12.45□□□□□ -0.42
CCM2-205ENST00000472223 RGS13O14921 159 aa12.45□□□□□ -0.42
CCM2-205ENST00000472223 AMBPP02760 352 aa12.45□□□□□ -0.42
CCM2-205ENST00000472223 LEPP41159 167 aa12.45□□□□□ -0.42
CCM2-205ENST00000472223 AKR1C3P42330 323 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms