RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 PTPN13Q12923 2485 aa9.74□□□□□ -0.85
IRF1-208ENST00000472045 CYTL1Q9NRR1 136 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 SLC25A34Q6PIV7 304 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 MED13Q9UHV7 2174 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 IGKV1-39P01597 117 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 IGKV1D-39P04432 117 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 ARL17AQ8IVW1 177 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 ANKHD1Q8IWZ3 2542 aaKnown RBP9.73□□□□□ -0.85
IRF1-208ENST00000472045 CFHR3Q02985 330 aa9.73□□□□□ -0.85
IRF1-208ENST00000472045 A0A087X0M5 115 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 A0A1B0GX30 115 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 OR5A1Q8NGJ0 315 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 C14orf178Q8N769 122 aaPredicted RBP9.72□□□□□ -0.85
IRF1-208ENST00000472045 NDUFA3O95167 84 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 POU2AF1Q16633 256 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 HIST2H2BCQ6DN03 193 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 ATP5L2Q7Z4Y8 100 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 ATOH7Q8N100 152 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 FAM90A2PQ658T7 463 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 Q86TA4 180 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 KLK9Q9UKQ9 250 aa9.72□□□□□ -0.85
IRF1-208ENST00000472045 TCF23Q7RTU1 214 aa9.71□□□□□ -0.85
IRF1-208ENST00000472045 WFDC11Q8NEX6 87 aa9.71□□□□□ -0.85
IRF1-208ENST00000472045 IGF2RP11717 2491 aa9.71□□□□□ -0.85
IRF1-208ENST00000472045 CLPSL1A2RUU4 121 aa9.71□□□□□ -0.85
IRF1-208ENST00000472045 A0A087WWL8 130 aa9.71□□□□□ -0.86
IRF1-208ENST00000472045 HBDP02042 147 aa9.71□□□□□ -0.86
IRF1-208ENST00000472045 CDKN1BP46527 198 aa9.71□□□□□ -0.86
IRF1-208ENST00000472045 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
IRF1-208ENST00000472045 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 H3BRN7 92 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 SLURP1P55000 103 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 NPBQ8NG41 125 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 SMPXQ9UHP9 88 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 RHODO00212 210 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 NCR2O95944 276 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 CDX1P47902 265 aaPredicted RBP9.7□□□□□ -0.86
IRF1-208ENST00000472045 IGHV7-81A0A0B4J1V7 117 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 GAGE12BA1L429 117 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 GAGE7O76087 117 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 IGLC1P0CG04 106 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 GAGE12FP0CL80 117 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 GAGE12GP0CL81 117 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 GAGE12IP0CL82 117 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 GUSBP1Q15486 140 aa9.7□□□□□ -0.86
IRF1-208ENST00000472045 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 PLA2G2AP14555 144 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 GP9P14770 177 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 PKIAP61925 76 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 MSMPQ1L6U9 139 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 LINC00469Q8N7U9 141 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 WDR87Q6ZQQ6 2873 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 SRSF3P84103 164 aaKnown RBP9.69□□□□□ -0.86
IRF1-208ENST00000472045 DNAL4O96015 105 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 AZU1P20160 251 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 PAX9P55771 341 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 CKS1BP61024 79 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 PHLDA1Q8WV24 401 aaPredicted RBP9.69□□□□□ -0.86
IRF1-208ENST00000472045 VCYO14598 125 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 PRSS57Q6UWY2 283 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 A8MXK9 166 aa9.69□□□□□ -0.86
IRF1-208ENST00000472045 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
IRF1-208ENST00000472045 IGLC7A0M8Q6 106 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 LYL1P12980 280 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 SIRPDQ9H106 197 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 TMEM86BQ8N661 226 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 Q8N7P7 452 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 C5orf56Q8N8D9 126 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 TMEM75Q8N9X5 138 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 DEFB104AQ8WTQ1 72 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 UQCR10Q9UDW1 63 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 LAGE3Q14657 143 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 BCL6BQ8N143 479 aaPredicted RBP9.68□□□□□ -0.86
IRF1-208ENST00000472045 C1orf159Q96HA4 380 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 ATP6V0BQ99437 205 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 GNB1LQ9BYB4 327 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
IRF1-208ENST00000472045 Q6ZSR3 168 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 TMEM131Q92545 1883 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 MS4A6AQ9H2W1 248 aa9.68□□□□□ -0.86
IRF1-208ENST00000472045 DNAJC9-AS1A6NH13 148 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 D6R8Y8 96 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 CIDEAO60543 219 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 LINC00614P0C842 121 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 ARFGEF3Q5TH69 2177 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 RBMY1BA6NDE4 496 aaKnown RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 RBMY1EA6NEQ0 496 aaKnown RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 GAGE12JA6NER3 117 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 RBMY1DP0C7P1 496 aaKnown RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 RBMY1A1P0DJD3 496 aaKnown RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 RBMY1CP0DJD4 496 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms