RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 NAPSAO96009 420 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 SAA2P0DJI9 122 aaPredicted RBP2□□□□□ -2.09
HDAC9-221ENST00000471887 CNTFRP26992 372 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 PPP3R1P63098 170 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 TMEM267Q0VDI3 215 aaPredicted RBP2□□□□□ -2.09
HDAC9-221ENST00000471887 IL18Q14116 193 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 Q499Y3 187 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 XAF1Q6GPH4 301 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 Q8N402 240 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 INO80EQ8NBZ0 244 aaPredicted RBP2□□□□□ -2.09
HDAC9-221ENST00000471887 OR10K1Q8NGX5 313 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 OR4K15Q8NH41 348 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 MRPL30Q8TCC3 161 aaKnown RBP2□□□□□ -2.09
HDAC9-221ENST00000471887 Q96MT0 163 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 OR4C12Q96R67 309 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 GPER1Q99527 375 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 ALX4Q9H161 411 aaPredicted RBP2□□□□□ -2.09
HDAC9-221ENST00000471887 TAF9BQ9HBM6 251 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 TRAPPC2LQ9UL33 140 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 ERGIC3Q9Y282 383 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 WASHC3Q9Y3C0 194 aa2□□□□□ -2.09
HDAC9-221ENST00000471887 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 LYSTQ99698 3801 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 TRAV8-7A0A075B6U6 113 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 SLC22A1O15245 554 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 SYNGR2O43760 224 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 ATP5HO75947 161 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 CA2P00918 260 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 IFNA6P05013 189 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 UBBP0CG47 229 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 PPP1CCP36873 323 aaKnown RBP1.99□□□□□ -2.09
HDAC9-221ENST00000471887 GTF2A1P52655 376 aaPredicted RBP1.99□□□□□ -2.09
HDAC9-221ENST00000471887 RPL18AQ02543 176 aaKnown RBP1.99□□□□□ -2.09
HDAC9-221ENST00000471887 KLK9Q2XQG4 91 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 ACTBL2Q562R1 376 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 UNQ5815/PRO19632Q6UWF5 114 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 GLIPR1L1Q6UWM5 242 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.99□□□□□ -2.09
HDAC9-221ENST00000471887 NEK7Q8TDX7 302 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 ORAOV1Q8WV07 137 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 GALMQ96C23 342 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 USMG5Q96IX5 58 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 S100A13Q99584 98 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 TSNAXQ99598 290 aaKnown RBP1.99□□□□□ -2.09
HDAC9-221ENST00000471887 FBXL15Q9H469 300 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 BABAM2Q9NXR7 383 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 CKLFQ9UBR5 152 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 KLK9Q9UKQ9 250 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 RABL2BQ9UNT1 228 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 ORC6Q9Y5N6 252 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 FAT2Q9NYQ8 4349 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 CSMD3Q7Z407 3707 aa1.99□□□□□ -2.09
HDAC9-221ENST00000471887 ABCA13Q86UQ4 5058 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.98□□□□□ -2.09
HDAC9-221ENST00000471887 TRAV8-6A0A0B4J262 113 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 LOC100130705A0A1B0GUX0 176 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 EFCAB10A6NFE3 127 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 FAM223BA6NKX1 122 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 TMEM14DPA8MWL7 114 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 A8MWP6 167 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 H3BQ85 93 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 HSBP1O75506 76 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 CRTAPO75718 401 aaPredicted RBP1.98□□□□□ -2.09
HDAC9-221ENST00000471887 TRGV3P03979 118 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 IGKV1-16P04430 117 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 SEC11BP0C7V7 166 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 HLA-GP17693 338 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 MYL12AP19105 171 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 SRMP19623 302 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 CD40LGP29965 261 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 FUSP35637 526 aaKnown RBP eCLIP1.98□□□□□ -2.09
HDAC9-221ENST00000471887 LGALS7P47929 136 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 SERPINB10P48595 397 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 ETV1P50549 477 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 TPPP2P59282 170 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 UBE2KP61086 200 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 HLA-DRB3P79483 266 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 QRFPP83859 136 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 FXYD3Q14802 87 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 SSX1Q16384 188 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 RPL39P5Q59GN2 51 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 GLT8D1Q68CQ7 371 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 Q6ZS49 121 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 FAM223AQ8IWN6 122 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 SLC7A5P1Q8MH63 180 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 LFNGQ8NES3 379 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 FAM103A1Q9BTL3 118 aaKnown RBP1.98□□□□□ -2.09
HDAC9-221ENST00000471887 C9orf16Q9BUW7 83 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 ARV1Q9H2C2 271 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 BANF2Q9H503 90 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 C12orf4Q9NQ89 552 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 ABRACLQ9P1F3 81 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 METTL1Q9UBP6 276 aaKnown RBP1.98□□□□□ -2.09
HDAC9-221ENST00000471887 PEF1Q9UBV8 284 aaKnown RBP1.98□□□□□ -2.09
HDAC9-221ENST00000471887 VAX2Q9UIW0 290 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 DNAH2Q9P225 4427 aa1.98□□□□□ -2.09
HDAC9-221ENST00000471887 TRBV6-7A0A0A0MS04 114 aa1.97□□□□□ -2.09
HDAC9-221ENST00000471887 TRAV25A0A0B4J276 109 aa1.97□□□□□ -2.09
HDAC9-221ENST00000471887 NUPR2A6NF83 97 aa1.97□□□□□ -2.09
HDAC9-221ENST00000471887 SDHAF1A6NFY7 115 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms