RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 ZNF586Q9NXT0 402 aa8.14□□□□□ -1.11
COL4A3-205ENST00000471862 H0YIZ8 118 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 PRAF2O60831 178 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 ZNF253O75346 499 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 MPDU1O75352 247 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 SIX6O95475 246 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 HTN3P15516 51 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 FGF7P21781 194 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 NHLH2Q02577 135 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 KIR3DS1Q14943 382 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 TMEM88Q6PEY1 159 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 C20orf144Q9BQM9 153 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 PARD6GQ9BYG4 376 aaPredicted RBP8.13□□□□□ -1.11
COL4A3-205ENST00000471862 NMES1Q9C002 83 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 OR5AC2Q9NZP5 309 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 TMEM14CQ9P0S9 112 aa8.13□□□□□ -1.11
COL4A3-205ENST00000471862 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 GFI1BQ5VTD9 330 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 OR10J6PQ8NGY7 276 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 RNASE8Q8TDE3 154 aaKnown RBP8.12□□□□□ -1.11
COL4A3-205ENST00000471862 MRPL53Q96EL3 112 aaKnown RBP8.12□□□□□ -1.11
COL4A3-205ENST00000471862 C16orf74Q96GX8 76 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 ODF3Q96PU9 254 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 LINC01587Q99440 93 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 MARVELD1Q9BSK0 173 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 NPCDR1Q9BY65 106 aa8.12□□□□□ -1.11
COL4A3-205ENST00000471862 TRBV19A0A075B6N1 114 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 E5RGE8 158 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 H7BYZ3 331 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 NDUFB4O95168 129 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 CT45A10P0DMU9 189 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 HIST1H1EP10412 219 aaKnown RBP8.11□□□□□ -1.11
COL4A3-205ENST00000471862 FCN2Q15485 313 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 LGALS9BQ3B8N2 356 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 RNF212Q495C1 297 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 GCSAMLQ5JQS6 135 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 C15orf53Q8NAA6 179 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 OR5C1Q8NGR4 320 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 TMEM263Q8WUH6 116 aaKnown RBP8.11□□□□□ -1.11
COL4A3-205ENST00000471862 SLC25A31Q9H0C2 315 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
COL4A3-205ENST00000471862 PKHD1P08F94 4074 aa8.11□□□□□ -1.11
COL4A3-205ENST00000471862 M0R3E3 92 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 RTL8CO15255 209 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 RLN2P04090 185 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 DEFB130BP0DP73 79 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 DEFB130AP0DP74 79 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 PYYP10082 97 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 H2BFSP57053 126 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 CYCSP99999 105 aaKnown RBP8.1□□□□□ -1.11
COL4A3-205ENST00000471862 PDE6HQ13956 83 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 Q6ZR54 194 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 LINC00612Q8N6U2 182 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 THAP6Q8TBB0 222 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 FAM167A-AS1Q96KT0 104 aa8.1□□□□□ -1.11
COL4A3-205ENST00000471862 TIMM8BQ9Y5J9 83 aaPredicted RBP8.1□□□□□ -1.11
COL4A3-205ENST00000471862 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 CBY3A6NI87 242 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 ATP5G1P05496 136 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 ATP5G3P48201 142 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 LRRC37A5PQ49AS3 106 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 UBE2DNLQ8IWF7 75 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 FAM19A4Q96LR4 140 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 SLC25A2Q9BXI2 301 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 WDR61Q9GZS3 305 aaKnown RBP8.09□□□□□ -1.11
COL4A3-205ENST00000471862 NOP10Q9NPE3 64 aaKnown RBP8.09□□□□□ -1.11
COL4A3-205ENST00000471862 PRELID1Q9Y255 219 aa8.09□□□□□ -1.11
COL4A3-205ENST00000471862 PKD1P98161 4303 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 M0R2N4 97 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 HTN1P15515 57 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 LEPP41159 167 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 CLINT1Q14677 625 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 MIR17HGQ75NE6 70 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 PPP1R1CQ8WVI7 109 aa8.08□□□□□ -1.12
COL4A3-205ENST00000471862 IGLV2-18A0A075B6J9 118 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 KLLNB2CW77 178 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 F5H768 121 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 MPC2O95563 127 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 ERCC8Q13216 396 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 EXOC3-AS1Q8N2X6 119 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 LINC00477Q96M19 166 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 PYGO2Q9BRQ0 406 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 MRPL32Q9BYC8 188 aaKnown RBP8.07□□□□□ -1.12
COL4A3-205ENST00000471862 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 TIMM9Q9Y5J7 89 aa8.07□□□□□ -1.12
COL4A3-205ENST00000471862 TRAV12-3A0A0B4J271 114 aa8.06□□□□□ -1.12
COL4A3-205ENST00000471862 J3KRW8 73 aa8.06□□□□□ -1.12
COL4A3-205ENST00000471862 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
COL4A3-205ENST00000471862 SLC25A5P05141 298 aaKnown RBP8.06□□□□□ -1.12
COL4A3-205ENST00000471862 NBEAP1P0C6P0 100 aa8.06□□□□□ -1.12
COL4A3-205ENST00000471862 CRISP2P16562 243 aa8.06□□□□□ -1.12
COL4A3-205ENST00000471862 FAM3BP58499 235 aaPredicted RBP8.06□□□□□ -1.12
COL4A3-205ENST00000471862 DEFA1P59665 94 aa8.06□□□□□ -1.12
COL4A3-205ENST00000471862 DEFA3P59666 94 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms