RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
COMMD6-208ENST00000471682 PRKDCP78527 4128 aaKnown RBP11.24□□□□□ -0.61
COMMD6-208ENST00000471682 MAP1LC3B2A6NCE7 125 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 SULT1A2P50226 295 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 Q6ZWC4 215 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 SSX7Q7RTT5 188 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 OR8A1Q8NGG7 326 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 MAP1LC3BQ9GZQ8 125 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 CSTL1Q9H114 145 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
COMMD6-208ENST00000471682 EIF3GO75821 320 aaKnown RBP eCLIP11.23□□□□□ -0.61
COMMD6-208ENST00000471682 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
COMMD6-208ENST00000471682 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 RANP62826 216 aaKnown RBP11.23□□□□□ -0.61
COMMD6-208ENST00000471682 GDF5OSQ5U4N7 250 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 FAM213BQ8TBF2 198 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 TM2D3Q9BRN9 247 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 Q9H3A6 140 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 AGRNO00468 2067 aa11.23□□□□□ -0.61
COMMD6-208ENST00000471682 TRAV1-1A0A0B4J248 108 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 CSN1S1P47710 185 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 FHITP49789 147 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 ICAM4Q14773 271 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 EXOC3-AS1Q8N2X6 119 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 SPATA25Q9BR10 227 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 NKX6-2Q9C056 277 aaPredicted RBP11.22□□□□□ -0.61
COMMD6-208ENST00000471682 TP53TG1Q9Y2A0 90 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
COMMD6-208ENST00000471682 ZNF705FA8MVS1 300 aaPredicted RBP11.21□□□□□ -0.61
COMMD6-208ENST00000471682 F6UB75 175 aa11.21□□□□□ -0.61
COMMD6-208ENST00000471682 TEX46H3BTG2 121 aa11.21□□□□□ -0.61
COMMD6-208ENST00000471682 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
COMMD6-208ENST00000471682 CNN1P51911 297 aaKnown RBP11.21□□□□□ -0.61
COMMD6-208ENST00000471682 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.61
COMMD6-208ENST00000471682 SFT2D1Q8WV19 159 aa11.21□□□□□ -0.61
COMMD6-208ENST00000471682 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 M0R3E3 92 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
COMMD6-208ENST00000471682 PPT1P50897 306 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 DEFB1P60022 68 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 HIST1H1AQ02539 215 aaPredicted RBP11.2□□□□□ -0.62
COMMD6-208ENST00000471682 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 ZMAT4Q9H898 229 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
COMMD6-208ENST00000471682 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 PGPA6NDG6 321 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 NPIPB6E9PJ23 425 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 HBE1P02100 147 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 AMBPP02760 352 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 FGF8P55075 233 aaPredicted RBP11.19□□□□□ -0.62
COMMD6-208ENST00000471682 AMTNQ6UX39 209 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 C9orf47Q6ZRZ4 202 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 LINC00477Q96M19 166 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 ASCL2Q99929 193 aa11.19□□□□□ -0.62
COMMD6-208ENST00000471682 PRAC2D3DTV9 90 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 BOLA2-SMG1P6H3BVE0 249 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 CA1P00915 261 aaPredicted RBP11.18□□□□□ -0.62
COMMD6-208ENST00000471682 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
COMMD6-208ENST00000471682 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 C5orf17Q8NAS9 161 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 RNF183Q96D59 192 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 TCEAL7Q9BRU2 100 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 TMPRSS5Q9H3S3 457 aa11.18□□□□□ -0.62
COMMD6-208ENST00000471682 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
COMMD6-208ENST00000471682 DIRC3C9JPN6 131 aa11.17□□□□□ -0.62
COMMD6-208ENST00000471682 BLOC1S1P78537 153 aa11.17□□□□□ -0.62
COMMD6-208ENST00000471682 PMS2P11Q13670 270 aa11.17□□□□□ -0.62
COMMD6-208ENST00000471682 RCHY1Q96PM5 261 aa11.17□□□□□ -0.62
COMMD6-208ENST00000471682 PPP1R14DQ9NXH3 145 aa11.17□□□□□ -0.62
COMMD6-208ENST00000471682 FAM74A7A6NL05 159 aa11.16□□□□□ -0.62
COMMD6-208ENST00000471682 ZNF705EA8MWA4 302 aaPredicted RBP11.16□□□□□ -0.62
COMMD6-208ENST00000471682 SPRY2O43597 315 aa11.16□□□□□ -0.62
COMMD6-208ENST00000471682 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
COMMD6-208ENST00000471682 ZNF705DP0CH99 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD6-208ENST00000471682 ZNF705BP0CI00 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD6-208ENST00000471682 TSPOP30536 169 aa11.16□□□□□ -0.62
COMMD6-208ENST00000471682 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
COMMD6-208ENST00000471682 ALKAL2Q6UX46 152 aa11.16□□□□□ -0.62
COMMD6-208ENST00000471682 CSNK1G2-AS1Q8NCQ2 148 aa11.16□□□□□ -0.62
COMMD6-208ENST00000471682 FBLL1A6NHQ2 334 aaKnown RBP11.15□□□□□ -0.62
COMMD6-208ENST00000471682 GGTLC3B5MD39 225 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 NMBP08949 121 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 DEFB135Q30KP9 77 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 TMEM78Q5T7P6 136 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 TXNDC17Q9BRA2 123 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 OVOL2Q9BRP0 275 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 AGPAT4-IT1Q9H0P7 198 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 YTHDF2Q9Y5A9 579 aaKnown RBP11.15□□□□□ -0.62
COMMD6-208ENST00000471682 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
COMMD6-208ENST00000471682 K7EQM0 130 aa11.14□□□□□ -0.63
COMMD6-208ENST00000471682 TCRAP04437 139 aa11.14□□□□□ -0.63
COMMD6-208ENST00000471682 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
COMMD6-208ENST00000471682 LEPP41159 167 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms