RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-210	ENST00000470396	PDE6H	Q13956	83 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	GUK1	Q16774	197 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	SPINK13	Q1W4C9	94 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	TMEM41B	Q5BJD5	291 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	EBLN2	Q6P2I7	272 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	SSX7	Q7RTT5	188 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	BAP18	Q8IXM2	172 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	EXOC3-AS1	Q8N2X6	119 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	RPP25L	Q8N5L8	163 aa	Known RBP	4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	OR2G3	Q8NGZ4	309 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	LRRC20	Q8TCA0	184 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	SCGB1C1	Q8TD33	95 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	BLNK	Q8WV28	456 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	SLC50A1	Q9BRV3	221 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	MRPL32	Q9BYC8	188 aa	Known RBP	4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	C11orf68	Q9H3H3	251 aa	Known RBP	4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	KCNIP2	Q9NS61	270 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	RNF24	Q9Y225	148 aa		4.92	□□□□□ -1.62
PSMD4-210	ENST00000470396	TRAV12-2	A0A075B6T6	113 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	NPIPB6	E9PJ23	425 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	HMGB3	O15347	200 aa	Known RBP	4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	NBEAP1	P0C6P0	100 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	CT45A10	P0DMU9	189 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	M6PR	P20645	277 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	NUTF2	P61970	127 aa	Known RBP	4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	RHOB	P62745	196 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	ZNF266	Q14584	549 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	ZNF726P1	Q15940	193 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	RNF141	Q8WVD5	230 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	PSMG3	Q9BT73	122 aa	Predicted RBP	4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	PAXX	Q9BUH6	204 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	OR51M1	Q9H341	326 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	PLA2G2E	Q9NZK7	142 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	CELA1	Q9UNI1	258 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	FRAS1	Q86XX4	4008 aa		4.91	□□□□□ -1.62
PSMD4-210	ENST00000470396	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396		A0A1B0GVG6	124 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	HMSD	A8MTL9	139 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	BOLA2-SMG1P6	H3BVE0	249 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	OR7C2	O60412	319 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	DUSP14	O95147	198 aa	Known RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	IGKV2D-40	P01614	121 aa	Predicted RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	ARL14EPL	P0DKL9	152 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	MIF	P14174	115 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	NANOS2	P60321	138 aa	Known RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	UBE2L3	P68036	154 aa	Known RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	CD300C	Q08708	224 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	ERCC8	Q13216	396 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	ZNF345	Q14585	488 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	ICAM4	Q14773	271 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	KHDC3L	Q587J8	217 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	FAM122C	Q6P4D5	195 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	KCNRG	Q8N5I3	272 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	OR10G4	Q8NGN3	311 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	OR10G9	Q8NGN4	311 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	OR10G7	Q8NGN6	311 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	RAB24	Q969Q5	203 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	MRPL53	Q96EL3	112 aa	Known RBP	4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	FAM19A4	Q96LR4	140 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	IGF2BP2-AS1	Q96M15	143 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	NEU1	Q99519	415 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	VGLL1	Q99990	258 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	C1QTNF4	Q9BXJ3	329 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	DNAH6	Q9C0G6	4158 aa		4.9	□□□□□ -1.63
PSMD4-210	ENST00000470396	IGHV3OR16-12	A0A075B7B8	117 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	PLAC8L1	A1L4L8	177 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	STAG3L2	P0CL84	134 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	STAG3L3	P0CL85	134 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	RAN	P62826	216 aa	Known RBP	4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	SERF2	P84101	59 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	PMS2P11	Q13670	270 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	PRR9	Q5T870	116 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	GFI1B	Q5VTD9	330 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396		Q6ZQT7	251 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	SUN5	Q8TC36	379 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	AGPAT4-IT1	Q9H0P7	198 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396		Q9H3A6	140 aa		4.89	□□□□□ -1.63
PSMD4-210	ENST00000470396	hCG_2014768	A0A024R1R8	64 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	TAAR5	O14804	337 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	JTB	O76095	146 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	INS	P01308	110 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	AZU1	P20160	251 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	CDKN1B	P46527	198 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	CDC34	P49427	236 aa	Predicted RBP	4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	FHIT	P49789	147 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	TAS2R45	P59539	299 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	C12orf74	Q32Q52	190 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	PQLC2	Q6ZP29	291 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	C9orf47	Q6ZRZ4	202 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	ZNF767P	Q75MW2	155 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	TCTE3	Q8IZS6	198 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	ZFAND2A	Q8N6M9	145 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	OR10J6P	Q8NGY7	276 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396		Q8TAT8	98 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	C11orf45	Q8TAV5	145 aa		4.88	□□□□□ -1.63
PSMD4-210	ENST00000470396	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms