RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 IGFL4Q6B9Z1 124 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 EBLN2Q6P2I7 272 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 SSX7Q7RTT5 188 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 ZNF738Q8NE65 137 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
CDC42SE1-203ENST00000470278 EIF3GO75821 320 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 CXorf1O96002 111 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 RPL35AP18077 110 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 HLA-DMBP28068 263 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 RPUSD4Q96CM3 377 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 PHYHIPLQ96FC7 376 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 AAMDCQ9H7C9 122 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 PRELID1Q9Y255 219 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 AGRNO00468 2067 aa10.97□□□□□ -0.65
CDC42SE1-203ENST00000470278 F6UB75 175 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 HMGB3O15347 200 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 RAB5CP51148 216 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 NKX2-5P52952 324 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 DEFB1P60022 68 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 Q6ZWC4 215 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 SPATA25Q9BR10 227 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 CSTL1Q9H114 145 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
CDC42SE1-203ENST00000470278 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-203ENST00000470278 GCHFRP30047 84 aa10.95□□□□□ -0.66
CDC42SE1-203ENST00000470278 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-203ENST00000470278 ASCL2Q99929 193 aa10.95□□□□□ -0.66
CDC42SE1-203ENST00000470278 TP53TG1Q9Y2A0 90 aa10.95□□□□□ -0.66
CDC42SE1-203ENST00000470278 BIRC6Q9NR09 4857 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 MAP1LC3B2A6NCE7 125 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 M0R3E3 92 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 CA1P00915 261 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 ICAM4Q14773 271 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 MAP1LC3BQ9GZQ8 125 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 Q9H3A6 140 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 ZMAT4Q9H898 229 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 OTORQ9NRC9 128 aa10.94□□□□□ -0.66
CDC42SE1-203ENST00000470278 ZNF705FA8MVS1 300 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 GIG44P09565 113 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 FHITP49789 147 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 SULT1A2P50226 295 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 FAM213BQ8TBF2 198 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 MBD3L1Q8WWY6 194 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
CDC42SE1-203ENST00000470278 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 NPIPB6E9PJ23 425 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 OR10J6PQ8NGY7 276 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 RXFP4Q8TDU9 374 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 U3KQK5 164 aa10.92□□□□□ -0.66
CDC42SE1-203ENST00000470278 DEFB135Q30KP9 77 aa10.91□□□□□ -0.66
CDC42SE1-203ENST00000470278 RNF183Q96D59 192 aa10.91□□□□□ -0.66
CDC42SE1-203ENST00000470278 ODF3Q96PU9 254 aa10.91□□□□□ -0.66
CDC42SE1-203ENST00000470278 OVOL2Q9BRP0 275 aa10.91□□□□□ -0.66
CDC42SE1-203ENST00000470278 ARL2-SNX15V9GYD0 113 aa10.91□□□□□ -0.66
CDC42SE1-203ENST00000470278 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 AMBPP02760 352 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 ZNF705DP0CH99 300 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 ZNF705BP0CI00 300 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 CSN1S1P47710 185 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 CSNK1G2-AS1Q8NCQ2 148 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 SFT2D1Q8WV19 159 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 RCHY1Q96PM5 261 aa10.9□□□□□ -0.66
CDC42SE1-203ENST00000470278 TRAV1-1A0A0B4J248 108 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 BOLA2-SMG1P6H3BVE0 249 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 SPRY2O43597 315 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 H2AFB1P0C5Y9 115 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 IQCF2Q8IXL9 164 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 C5orf17Q8NAS9 161 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 SLC35B3Q9H1N7 401 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 RETNQ9HD89 108 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
CDC42SE1-203ENST00000470278 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
CDC42SE1-203ENST00000470278 PGPA6NDG6 321 aa10.88□□□□□ -0.67
CDC42SE1-203ENST00000470278 DIRC3C9JPN6 131 aa10.88□□□□□ -0.67
CDC42SE1-203ENST00000470278 LINC00477Q96M19 166 aa10.88□□□□□ -0.67
CDC42SE1-203ENST00000470278 TMPRSS5Q9H3S3 457 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms