RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 CLEC5AQ9NY25 188 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 HLA-DRB4X5D2U9 266 aa7.78□□□□□ -1.16
SMC1A-206ENST00000470241 A0A0J9YX75 114 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 ICAM4Q14773 271 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 ALKAL2Q6UX46 152 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 STHQ8IWL8 128 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 LYPD1Q8N2G4 141 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 OR8A1Q8NGG7 326 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 SFT2D1Q8WV19 159 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 RPUSD4Q96CM3 377 aaKnown RBP7.77□□□□□ -1.17
SMC1A-206ENST00000470241 MRPL53Q96EL3 112 aaKnown RBP7.77□□□□□ -1.17
SMC1A-206ENST00000470241 Q9H3A6 140 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 AAMDCQ9H7C9 122 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 TMEM167BQ9NRX6 74 aa7.77□□□□□ -1.17
SMC1A-206ENST00000470241 H2AFB1P0C5Y9 115 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 ZNF705DP0CH99 300 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-206ENST00000470241 ZNF705BP0CI00 300 aaPredicted RBP7.76□□□□□ -1.17
SMC1A-206ENST00000470241 HAGHQ16775 308 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 SBSPONQ8IVN8 264 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 IQCF2Q8IXL9 164 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 B9D2Q9BPU9 175 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 OTORQ9NRC9 128 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 PRELID1Q9Y255 219 aa7.76□□□□□ -1.17
SMC1A-206ENST00000470241 HUWE1Q7Z6Z7 4374 aaKnown RBP7.76□□□□□ -1.17
SMC1A-206ENST00000470241 TRAV1-1A0A0B4J248 108 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 KIR2DL5BA0A0G2JN68 375 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 KIR2DL5BA0A0G2JPC4 375 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 A0A1B0GV50 99 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 PGPA6NDG6 321 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 A8MTW9 85 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 IGKV3-20P01619 116 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 CNN1P51911 297 aaKnown RBP7.75□□□□□ -1.17
SMC1A-206ENST00000470241 KIR2DL5AQ8N109 375 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 OR4B1Q8NGF8 309 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 KIR2DL5BQ8NHK3 375 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 ASCL2Q99929 193 aa7.75□□□□□ -1.17
SMC1A-206ENST00000470241 YTHDF2Q9Y5A9 579 aaKnown RBP7.75□□□□□ -1.17
SMC1A-206ENST00000470241 A0A1W2PRE2 83 aa7.74□□□□□ -1.17
SMC1A-206ENST00000470241 ZNF705EA8MWA4 302 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-206ENST00000470241 GGTLC3B5MD39 225 aa7.74□□□□□ -1.17
SMC1A-206ENST00000470241 DUSP14O95147 198 aaKnown RBP7.74□□□□□ -1.17
SMC1A-206ENST00000470241 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-206ENST00000470241 APOC4P55056 127 aa7.74□□□□□ -1.17
SMC1A-206ENST00000470241 CCL20P78556 96 aa7.74□□□□□ -1.17
SMC1A-206ENST00000470241 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
SMC1A-206ENST00000470241 AMTNQ6UX39 209 aa7.74□□□□□ -1.17
SMC1A-206ENST00000470241 CSTL1Q9H114 145 aa7.74□□□□□ -1.17
SMC1A-206ENST00000470241 IGKV2-40A0A087WW87 121 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-206ENST00000470241 FAM74A7A6NL05 159 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 DIRC3C9JPN6 131 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 NPIPB6E9PJ23 425 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 IGKV2D-40P01614 121 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-206ENST00000470241 CSN1S1P47710 185 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 UBE2G2P60604 165 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 SUMO1P63165 101 aaKnown RBP7.73□□□□□ -1.17
SMC1A-206ENST00000470241 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
SMC1A-206ENST00000470241 TEX261Q6UWH6 196 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 ARL6IP6Q8N6S5 226 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 OR10J6PQ8NGY7 276 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 RXFP4Q8TDU9 374 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 TM2D3Q9BRN9 247 aa7.73□□□□□ -1.17
SMC1A-206ENST00000470241 UBE2CO00762 179 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 CA1P00915 261 aaPredicted RBP7.72□□□□□ -1.17
SMC1A-206ENST00000470241 HBE1P02100 147 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 SLC25A5P05141 298 aaKnown RBP7.72□□□□□ -1.17
SMC1A-206ENST00000470241 CT45A10P0DMU9 189 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 FXYD7P58549 80 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 GNG5P63218 68 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 ERCC8Q13216 396 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 C9orf47Q6ZRZ4 202 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 ZNF680Q8NEM1 530 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 VGLL1Q99990 258 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 SLC35B3Q9H1N7 401 aa7.72□□□□□ -1.17
SMC1A-206ENST00000470241 TEX46H3BTG2 121 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 PAGE4O60829 102 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 TCRAP04437 139 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 ATP5G3P48201 142 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 BLOC1S1P78537 153 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 CCDC28AQ8IWP9 274 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 CMTM2Q8TAZ6 248 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 RETNQ9HD89 108 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 EPDR1Q9UM22 224 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 RPH3ALQ9UNE2 315 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 ARL2-SNX15V9GYD0 113 aa7.71□□□□□ -1.18
SMC1A-206ENST00000470241 RBAKDNA6NC62 111 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 CRXO43186 299 aaPredicted RBP7.7□□□□□ -1.18
SMC1A-206ENST00000470241 PPT1P50897 306 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 NUTF2P61970 127 aaKnown RBP7.7□□□□□ -1.18
SMC1A-206ENST00000470241 PMS2P11Q13670 270 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 SPINK13Q1W4C9 94 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 DEFB135Q30KP9 77 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 CST9LP1Q5W188 147 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 GOLT1AQ6ZVE7 132 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 Q6ZWC4 215 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 CSNK1G2-AS1Q8NCQ2 148 aa7.7□□□□□ -1.18
SMC1A-206ENST00000470241 LYPD6BQ8NI32 183 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms