RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 C10orf113Q5VZT2 155 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 MIR17HGQ75NE6 70 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 EXOC3-AS1Q8N2X6 119 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 LRRC20Q8TCA0 184 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 SLC39A9Q9NUM3 307 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 GOLT1BQ9Y3E0 138 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 DNAH8Q96JB1 4490 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 A0A1B0GVY2 172 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 SMIM9A6NGZ8 99 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 E5RGE8 158 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 HBE1P02100 147 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 FGF7P21781 194 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 NUP62P37198 522 aaPredicted RBP6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 BAXQ07812 192 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 CD300CQ08708 224 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 CLINT1Q14677 625 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 RRN3P1Q2M238 152 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 PRR9Q5T870 116 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 GFI1BQ5VTD9 330 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 POM121L12Q8N7R1 296 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 PPP1R1CQ8WVI7 109 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 VGLL1Q99990 258 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 TMEM208Q9BTX3 173 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 NOP10Q9NPE3 64 aaKnown RBP6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 UQCC1Q9NVA1 299 aa6.47□□□□□ -1.37
SHROOM3-203ENST00000469923 NACAE9PAV3 2078 aa6.46□□□□□ -1.37
SHROOM3-203ENST00000469923 FAT1Q14517 4588 aa6.46□□□□□ -1.37
SHROOM3-203ENST00000469923 BOLA2-SMG1P6H3BVE0 249 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 MPC2O95563 127 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 AMBPP02760 352 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 HOXA5P20719 270 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 MEOX2P50222 304 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 DAD1P61803 113 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 CYCSP99999 105 aaKnown RBP6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 ATP6V1FQ16864 119 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 Q5BKY6 102 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 ZNF546Q86UE3 836 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 STX12Q86Y82 276 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 OR5C1Q8NGR4 320 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 BLNKQ8WV28 456 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 ZNF503Q96F45 646 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 NDUFAF3Q9BU61 184 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 SMIM3Q9BZL3 60 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 TP53TG3Q9ULZ0 132 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 PXMP4Q9Y6I8 212 aa6.46□□□□□ -1.38
SHROOM3-203ENST00000469923 IGKV2-40A0A087WW87 121 aaPredicted RBP6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 TRAV12-3A0A0B4J271 114 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 F5H768 121 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 PFDN1O60925 122 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 DUSP14O95147 198 aaKnown RBP6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 IGKV2D-40P01614 121 aaPredicted RBP6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 RPL29P47914 159 aaKnown RBP6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 B2MP61769 119 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 HBG1P69891 147 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 HBG2P69892 147 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 RAB31Q13636 194 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 Q6ZRG5 221 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 GPR82Q96P67 336 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 SLC25A31Q9H0C2 315 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 MUC4Q99102 2169 aa6.45□□□□□ -1.38
SHROOM3-203ENST00000469923 TRBV19A0A075B6N1 114 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 INSP01308 110 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 BTN1A1Q13410 526 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 PXDC1Q5TGL8 231 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 Q6ZR54 194 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 CHAC2Q8WUX2 184 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 NPCDR1Q9BY65 106 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 MED28Q9H204 178 aa6.44□□□□□ -1.38
SHROOM3-203ENST00000469923 A0A0J9YY99 117 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 GAGE12BA1L429 117 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 ZNF324O75467 553 aaPredicted RBP6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 GAGE7O76087 117 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 NUDT3O95989 172 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 OR10J4P0C629 311 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 GAGE12FP0CL80 117 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 GAGE12GP0CL81 117 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 GAGE12IP0CL82 117 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 RPL12P30050 165 aaKnown RBP6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 S100A7P31151 101 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 RNASE4P34096 147 aaKnown RBP6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 FAM122CQ6P4D5 195 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 Q6ZTI0 123 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 AKAP14Q86UN6 197 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 BPIFA4PQ86YQ2 179 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 RNASE8Q8TDE3 154 aaKnown RBP6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 RNF141Q8WVD5 230 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 FXYD5Q96DB9 178 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 FAM19A4Q96LR4 140 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 WDR61Q9GZS3 305 aaKnown RBP6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 PPP1R14DQ9NXH3 145 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 MBD2Q9UBB5 411 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 KLF12Q9Y4X4 402 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 HSPB11Q9Y547 144 aa6.43□□□□□ -1.38
SHROOM3-203ENST00000469923 TMEM189A5PLL7 270 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms