RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 LINC00854A0A1B0GVQ3 168 aa12.31□□□□□ -0.44
TTC28-205ENST00000469670 K7EP13 123 aa12.31□□□□□ -0.44
TTC28-205ENST00000469670 CTDSPLO15194 276 aa12.31□□□□□ -0.44
TTC28-205ENST00000469670 ZBTB8BQ8NAP8 495 aaPredicted RBP12.31□□□□□ -0.44
TTC28-205ENST00000469670 SYT8Q8NBV8 401 aa12.31□□□□□ -0.44
TTC28-205ENST00000469670 NAA50Q9GZZ1 169 aaKnown RBP12.31□□□□□ -0.44
TTC28-205ENST00000469670 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
TTC28-205ENST00000469670 H3BTX0 84 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 SLC17A3O00476 420 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 CTDSP2O14595 271 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 SPINK4O60575 86 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 EVI2AP22794 236 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 IL18Q14116 193 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 MRPL23Q16540 153 aaKnown RBP12.3□□□□□ -0.44
TTC28-205ENST00000469670 CTF1Q16619 201 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 TEPPQ6URK8 271 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 LRTM2Q8N967 370 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 NTN5Q8WTR8 489 aaPredicted RBP12.3□□□□□ -0.44
TTC28-205ENST00000469670 ST6GAL2Q96JF0 529 aa12.3□□□□□ -0.44
TTC28-205ENST00000469670 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
TTC28-205ENST00000469670 CRYBA4P53673 196 aa12.29□□□□□ -0.44
TTC28-205ENST00000469670 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
TTC28-205ENST00000469670 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
TTC28-205ENST00000469670 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
TTC28-205ENST00000469670 RABL2BQ9UNT1 228 aa12.29□□□□□ -0.44
TTC28-205ENST00000469670 KLF12Q9Y4X4 402 aa12.29□□□□□ -0.44
TTC28-205ENST00000469670 DNAH8Q96JB1 4490 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 PRAF2O60831 178 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 SLAQ13239 276 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 TMEM128Q5BJH2 165 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 LINC00305Q7Z4B0 112 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 BPIFA4PQ86YQ2 179 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 C8orf49Q96NF6 230 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 HHLA3Q9XRX5 114 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 PXMP4Q9Y6I8 212 aa12.28□□□□□ -0.44
TTC28-205ENST00000469670 C7orf71A4D174 169 aa12.27□□□□□ -0.45
TTC28-205ENST00000469670 K7EPK0 472 aa12.27□□□□□ -0.45
TTC28-205ENST00000469670 SLC25A5P05141 298 aaKnown RBP12.27□□□□□ -0.45
TTC28-205ENST00000469670 VAMP1P23763 118 aa12.27□□□□□ -0.45
TTC28-205ENST00000469670 TCL1AP56279 114 aa12.27□□□□□ -0.45
TTC28-205ENST00000469670 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.45
TTC28-205ENST00000469670 ANXA2RQ3ZCQ2 193 aa12.27□□□□□ -0.45
TTC28-205ENST00000469670 EIF4E3Q8N5X7 224 aaKnown RBP12.27□□□□□ -0.45
TTC28-205ENST00000469670 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
TTC28-205ENST00000469670 LRCOL1A6NCL2 159 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 HOXB5P09067 269 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 SLC38A11Q08AI6 406 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 NPVFQ9HCQ7 196 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 PSENENQ9NZ42 101 aa12.26□□□□□ -0.45
TTC28-205ENST00000469670 RABL2AQ9UBK7 228 aaPredicted RBP12.26□□□□□ -0.45
TTC28-205ENST00000469670 PSCAO43653 123 aa12.25□□□□□ -0.45
TTC28-205ENST00000469670 CRYGDP07320 174 aa12.25□□□□□ -0.45
TTC28-205ENST00000469670 IGLC2P0DOY2 106 aa12.25□□□□□ -0.45
TTC28-205ENST00000469670 FHL2Q14192 279 aa12.25□□□□□ -0.45
TTC28-205ENST00000469670 SAT2Q96F10 170 aaPredicted RBP12.25□□□□□ -0.45
TTC28-205ENST00000469670 DIRAS2Q96HU8 199 aa12.25□□□□□ -0.45
TTC28-205ENST00000469670 VGLL1Q99990 258 aa12.25□□□□□ -0.45
TTC28-205ENST00000469670 MRPL16Q9NX20 251 aaKnown RBP12.25□□□□□ -0.45
TTC28-205ENST00000469670 H3BQ15 152 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 CCNKO75909 580 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 SRIP30626 198 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
TTC28-205ENST00000469670 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 MORN5Q5VZ52 161 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 LINC00528Q8N1L1 170 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 C10orf126Q8N4M7 172 aa12.24□□□□□ -0.45
TTC28-205ENST00000469670 KLLNB2CW77 178 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 E5RGE8 158 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 K7EQD1 137 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 GOSR2O14653 212 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 ID3Q02535 119 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 CD300CQ08708 224 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 IBA57Q5T440 356 aaKnown RBP12.23□□□□□ -0.45
TTC28-205ENST00000469670 ZNF546Q86UE3 836 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 Q8N814 137 aa12.23□□□□□ -0.45
TTC28-205ENST00000469670 MRPL32Q9BYC8 188 aaKnown RBP12.23□□□□□ -0.45
TTC28-205ENST00000469670 CCDC59Q9P031 241 aaKnown RBP12.23□□□□□ -0.45
TTC28-205ENST00000469670 FNDC10F2Z333 226 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 COX7A2P2O60397 106 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 MPDU1O75352 247 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 SFT2D2O95562 160 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 C1QBP02746 253 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 ERCC8Q13216 396 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 OPCMLQ14982 345 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 TMEM37Q8WXS4 190 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 MGAT4CQ9UBM8 478 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
TTC28-205ENST00000469670 TRGV4A0A0C4DH28 118 aa12.21□□□□□ -0.45
TTC28-205ENST00000469670 METTL15P1P0C7V9 234 aa12.21□□□□□ -0.45
TTC28-205ENST00000469670 RNASE4P34096 147 aaKnown RBP12.21□□□□□ -0.45
TTC28-205ENST00000469670 PPP1R1AQ13522 171 aa12.21□□□□□ -0.45
TTC28-205ENST00000469670 RSL24D1Q9UHA3 163 aaKnown RBP12.21□□□□□ -0.45
TTC28-205ENST00000469670 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.45
TTC28-205ENST00000469670 LRP1Q07954 4544 aaKnown RBP12.21□□□□□ -0.45
TTC28-205ENST00000469670 AGPAT2O15120 278 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 SSSCA1O60232 199 aa12.2□□□□□ -0.46
TTC28-205ENST00000469670 GUK1Q16774 197 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms