RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 DIRC3C9JPN6 131 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 F8W036 122 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 H3BTX0 84 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 K7EQG2 157 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 SLC25A5P05141 298 aaKnown RBP9.59□□□□□ -0.87
TRAF4-208ENST00000469529 SNRPCP09234 159 aaKnown RBP9.59□□□□□ -0.87
TRAF4-208ENST00000469529 ADCYAP1P18509 176 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 EDN2P20800 178 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 CSN1S1P47710 185 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 PSG3Q16557 428 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 LCN12Q6JVE5 192 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 EXOC3-AS1Q8N2X6 119 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 CMTM2Q8TAZ6 248 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 SMIM12Q96EX1 92 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 LINC00052Q96N35 136 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
TRAF4-208ENST00000469529 SCO2A0A1W2PP80 73 aa9.58□□□□□ -0.88
TRAF4-208ENST00000469529 PEX7O00628 323 aa9.58□□□□□ -0.88
TRAF4-208ENST00000469529 IGLV1-51P01701 117 aa9.58□□□□□ -0.88
TRAF4-208ENST00000469529 C16orf92Q96LL3 132 aa9.58□□□□□ -0.88
TRAF4-208ENST00000469529 SPAG8Q99932 426 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-208ENST00000469529 PARLQ9H300 379 aa9.58□□□□□ -0.88
TRAF4-208ENST00000469529 ZNF727A8MUV8 499 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 K7EQM0 130 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 PF4P02776 101 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 RPL35P42766 123 aaKnown RBP9.57□□□□□ -0.88
TRAF4-208ENST00000469529 CNN1P51911 297 aaKnown RBP9.57□□□□□ -0.88
TRAF4-208ENST00000469529 RPL11P62913 178 aaKnown RBP9.57□□□□□ -0.88
TRAF4-208ENST00000469529 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
TRAF4-208ENST00000469529 TMEM241Q24JQ0 296 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 RBPMS2Q6ZRY4 209 aaKnown RBP9.57□□□□□ -0.88
TRAF4-208ENST00000469529 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 FMC1Q96HJ9 113 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 SDF2L1Q9HCN8 221 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 NAT8Q9UHE5 227 aa9.57□□□□□ -0.88
TRAF4-208ENST00000469529 M0R3E3 92 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 DNASE2O00115 360 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-208ENST00000469529 WIPF1O43516 503 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 IGLV2-11P01706 119 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 CMC4P56277 68 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-208ENST00000469529 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
TRAF4-208ENST00000469529 C9orf47Q6ZRZ4 202 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 TMEM61Q8N0U2 210 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 SVBPQ8N300 66 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 FAM110AQ9BQ89 295 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
TRAF4-208ENST00000469529 MCRIP2Q9BUT9 160 aaKnown RBP9.56□□□□□ -0.88
TRAF4-208ENST00000469529 NBEAL1Q6ZS30 2694 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 TRBV7-9A0A0J9YWB2 115 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 B4DEV8 164 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 AKR1C3P42330 323 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 SNRPD3P62318 126 aaKnown RBP9.55□□□□□ -0.88
TRAF4-208ENST00000469529 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 TVP23CQ96ET8 276 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 LINC00477Q96M19 166 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 MLST8Q9BVC4 326 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 ZFP30Q9Y2G7 519 aa9.55□□□□□ -0.88
TRAF4-208ENST00000469529 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
TRAF4-208ENST00000469529 TRBV20OR9-2A0A075B6H5 130 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 OR4C46A6NHA9 309 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 LTAP01374 205 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 APOC3P02656 99 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 GNG5P63218 68 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 PRR31Q5SQ13 230 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 SAPCD1Q5SSQ6 148 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 IGF2BP2-AS1Q96M15 143 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 LINC00479Q96M42 142 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 DERL1Q9BUN8 251 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 LENEPQ9Y5L5 61 aa9.54□□□□□ -0.88
TRAF4-208ENST00000469529 SNAPINO95295 136 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 IGLV2-8P01709 118 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 HLA-DMBP28068 263 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 UBE2G1P62253 170 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 FLI1Q01543 452 aaPredicted RBP9.53□□□□□ -0.88
TRAF4-208ENST00000469529 BEAN1Q3B7T3 259 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 C9orf66Q5T8R8 295 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 IGFL4Q6B9Z1 124 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 GOLT1AQ6ZVE7 132 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 BAGE2Q86Y30 109 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 RNF182Q8N6D2 247 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 OCC1Q8TAD7 63 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
TRAF4-208ENST00000469529 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
TRAF4-208ENST00000469529 PRAC2D3DTV9 90 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 SAP30O75446 220 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 GCGP01275 180 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 GNG4P50150 75 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 CEBPGP53567 150 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
TRAF4-208ENST00000469529 GUCA2BQ16661 112 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 ZNF674Q2M3X9 581 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 LINC01551Q86U37 167 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 TMEM183AQ8IXX5 376 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
TRAF4-208ENST00000469529 CLRN3Q8NCR9 226 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms