RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 OXA1LQ15070 435 aa13.03□□□□□ -0.32
PHGDH-204ENST00000469443 THAP6Q8TBB0 222 aa13.03□□□□□ -0.32
PHGDH-204ENST00000469443 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
PHGDH-204ENST00000469443 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-204ENST00000469443 PRAC2D3DTV9 90 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 ZNF253O75346 499 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 CDKN1BP46527 198 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 CLINT1Q14677 625 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 TMEM256Q8N2U0 113 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 OR10J6PQ8NGY7 276 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 NDUFAF3Q9BU61 184 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
PHGDH-204ENST00000469443 PRM2P04554 102 aa13.01□□□□□ -0.33
PHGDH-204ENST00000469443 TSPOP30536 169 aa13.01□□□□□ -0.33
PHGDH-204ENST00000469443 PLA2G2EQ9NZK7 142 aa13.01□□□□□ -0.33
PHGDH-204ENST00000469443 MPC2O95563 127 aa13□□□□□ -0.33
PHGDH-204ENST00000469443 PET100P0DJ07 73 aa13□□□□□ -0.33
PHGDH-204ENST00000469443 HIST1H1EP10412 219 aaKnown RBP13□□□□□ -0.33
PHGDH-204ENST00000469443 GCSAMLQ5JQS6 135 aa13□□□□□ -0.33
PHGDH-204ENST00000469443 LINC01587Q99440 93 aa13□□□□□ -0.33
PHGDH-204ENST00000469443 WDR61Q9GZS3 305 aaKnown RBP13□□□□□ -0.33
PHGDH-204ENST00000469443 KCNIP2Q9NS61 270 aa13□□□□□ -0.33
PHGDH-204ENST00000469443 BIRC6Q9NR09 4857 aa12.99□□□□□ -0.33
PHGDH-204ENST00000469443 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
PHGDH-204ENST00000469443 TRBV19A0A075B6N1 114 aa12.99□□□□□ -0.33
PHGDH-204ENST00000469443 DAD1P61803 113 aa12.99□□□□□ -0.33
PHGDH-204ENST00000469443 FAM210BQ96KR6 192 aa12.99□□□□□ -0.33
PHGDH-204ENST00000469443 DNAH10Q8IVF4 4471 aa12.99□□□□□ -0.33
PHGDH-204ENST00000469443 LYRM9A8MSI8 78 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 PYYP10082 97 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 AZU1P20160 251 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 TAS2R60P59551 318 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 PDE6HQ13956 83 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 MRPL53Q96EL3 112 aaKnown RBP12.98□□□□□ -0.33
PHGDH-204ENST00000469443 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 PARD6GQ9BYG4 376 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-204ENST00000469443 HSPB11Q9Y547 144 aa12.98□□□□□ -0.33
PHGDH-204ENST00000469443 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 C17orf112F2Z3M2 114 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 NDUFB4O95168 129 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 HTN3P15516 51 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 ATP5SQ99766 215 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 SLC25A2Q9BXI2 301 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 TIMM9Q9Y5J7 89 aa12.97□□□□□ -0.33
PHGDH-204ENST00000469443 H7BYZ3 331 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 M0R3E3 92 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 P0DMU3 169 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 FAM231AP0DMU4 169 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 FAM231CP0DMU5 169 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 KIR3DS1Q14943 382 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 C16orf74Q96GX8 76 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 FAM167A-AS1Q96KT0 104 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 ODF3Q96PU9 254 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 MRPL32Q9BYC8 188 aaKnown RBP12.96□□□□□ -0.33
PHGDH-204ENST00000469443 MBD2Q9UBB5 411 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 PRELID1Q9Y255 219 aa12.96□□□□□ -0.33
PHGDH-204ENST00000469443 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
PHGDH-204ENST00000469443 HTN1P15515 57 aa12.95□□□□□ -0.34
PHGDH-204ENST00000469443 RPL12P30050 165 aaKnown RBP12.95□□□□□ -0.34
PHGDH-204ENST00000469443 LEPP41159 167 aa12.95□□□□□ -0.34
PHGDH-204ENST00000469443 ZNF493Q6ZR52 646 aa12.95□□□□□ -0.34
PHGDH-204ENST00000469443 BLNKQ8WV28 456 aa12.95□□□□□ -0.34
PHGDH-204ENST00000469443 ALG5Q9Y673 324 aa12.95□□□□□ -0.34
PHGDH-204ENST00000469443 PTTG1O95997 202 aa12.94□□□□□ -0.34
PHGDH-204ENST00000469443 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
PHGDH-204ENST00000469443 AAMDCQ9H7C9 122 aa12.94□□□□□ -0.34
PHGDH-204ENST00000469443 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
PHGDH-204ENST00000469443 IFNA5P01569 189 aa12.93□□□□□ -0.34
PHGDH-204ENST00000469443 NBEAP1P0C6P0 100 aa12.93□□□□□ -0.34
PHGDH-204ENST00000469443 EXOC3-AS1Q8N2X6 119 aa12.93□□□□□ -0.34
PHGDH-204ENST00000469443 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
PHGDH-204ENST00000469443 RNASE8Q8TDE3 154 aaKnown RBP12.93□□□□□ -0.34
PHGDH-204ENST00000469443 TMEM263Q8WUH6 116 aaKnown RBP12.93□□□□□ -0.34
PHGDH-204ENST00000469443 SMIM3Q9BZL3 60 aa12.93□□□□□ -0.34
PHGDH-204ENST00000469443 NACAE9PAV3 2078 aa12.93□□□□□ -0.34
PHGDH-204ENST00000469443 J3KRW8 73 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 DEFB130BP0DP73 79 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 DEFB130AP0DP74 79 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 ICAM4Q14773 271 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 FCN2Q15485 313 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 FFAR4Q5NUL3 377 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 TMEM88Q6PEY1 159 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 SCGB1C1Q8TD33 95 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 PAXXQ9BUH6 204 aa12.92□□□□□ -0.34
PHGDH-204ENST00000469443 TIMM8BQ9Y5J9 83 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-204ENST00000469443 ERCC8Q13216 396 aa12.91□□□□□ -0.34
PHGDH-204ENST00000469443 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
PHGDH-204ENST00000469443 FXYD5Q96DB9 178 aa12.91□□□□□ -0.34
PHGDH-204ENST00000469443 LINC00477Q96M19 166 aa12.91□□□□□ -0.34
PHGDH-204ENST00000469443 TRAV12-3A0A0B4J271 114 aa12.9□□□□□ -0.34
PHGDH-204ENST00000469443 OR7C2O60412 319 aa12.9□□□□□ -0.34
PHGDH-204ENST00000469443 SLC25A5P05141 298 aaKnown RBP12.9□□□□□ -0.34
PHGDH-204ENST00000469443 OR10J4P0C629 311 aa12.9□□□□□ -0.34
PHGDH-204ENST00000469443 FAM122CQ6P4D5 195 aa12.9□□□□□ -0.34
PHGDH-204ENST00000469443 RNF141Q8WVD5 230 aa12.9□□□□□ -0.34
PHGDH-204ENST00000469443 AGPAT4-IT1Q9H0P7 198 aa12.9□□□□□ -0.34
PHGDH-204ENST00000469443 NOP10Q9NPE3 64 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms