RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SPANXDQ9BXN6 97 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 LINC00574Q9H8X3 128 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 TRBV19A0A075B6N1 114 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 IGHV5-10-1A0A0J9YXX1 117 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 F8VRH5 84 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 SMKR1H3BMG3 65 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 H7C1H1 209 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 TIMM8AO60220 97 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 TNFRSF6BO95407 300 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 LGALS1P09382 135 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 ID1P41134 155 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 MEIG1Q5JSS6 88 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 EXOC3-AS1Q8N2X6 119 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 RNF185Q96GF1 192 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 SCNM1Q9BWG6 230 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 MRPL36Q9P0J6 103 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 PCNX2A6NKB5 2137 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 LAMA3Q16787 3333 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 SDK2Q58EX2 2172 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 TRAV8-2A0A0B4J237 113 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 TRAV4A0A0B4J268 109 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 H3BTX0 84 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 SH2D1AO60880 128 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 IGLC6P0CF74 106 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 IL11RAQ14626 422 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 TMEM78Q5T7P6 136 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 ZFP2Q6ZN57 461 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 SLC25A45Q8N413 288 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 LEAP2Q969E1 77 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 DNAJC30Q96LL9 226 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 AKIRIN1Q9H9L7 192 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-207ENST00000469334 CGB1A6NKQ9 187 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 CEACAM4O75871 244 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 CD7P09564 240 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 FOLR3P41439 243 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 SIGLEC15Q6ZMC9 328 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 DEFB119Q8N690 84 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 RASL10AQ92737 203 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 SPANXCQ9NY87 97 aa7.09□□□□□ -1.28
SMARCE1-207ENST00000469334 IGLV2-18A0A075B6J9 118 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 PINLYPA6NC86 204 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 SLC25A20O43772 301 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 HOXA4Q00056 320 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 LAGE3Q14657 143 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 Q71RC1 249 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 SRSF8Q9BRL6 282 aaKnown RBP7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 NGBQ9NPG2 151 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 FZR1Q9UM11 496 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 PROCRQ9UNN8 238 aa7.08□□□□□ -1.28
SMARCE1-207ENST00000469334 H3BVH4 76 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 TM4SF5O14894 197 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 CD40P25942 277 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 RPL13AP40429 203 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 CXCL12P48061 93 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 PDE6HQ13956 83 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 CITED2Q99967 270 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 RPUSD1Q9UJJ7 312 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 CSDC2Q9Y534 153 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 LAMA2P24043 3122 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 TRAV8-4A0A0B4J246 113 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 WIPF1O43516 503 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 ANXA2RQ3ZCQ2 193 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 UTF1Q5T230 341 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 Q6ZS52 159 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 PPDPFQ9H3Y8 114 aa7.07□□□□□ -1.28
SMARCE1-207ENST00000469334 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 E7EUB6 86 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 NDUFA3O95167 84 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 IGHV3-48P01763 117 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 IGHG3P01860 377 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 SLC25A16P16260 332 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 LYZP61626 148 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 VMA21Q3ZAQ7 101 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 MBNL2Q5VZF2 373 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 C10orf126Q8N4M7 172 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 SHANK2-AS3Q9BTD1 123 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 MRPL20Q9BYC9 149 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 H3BRN7 92 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 LINC01565O15544 149 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 CRLF1O75462 422 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 SCGB2A1O75556 95 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 HLA-DMBP28068 263 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 ZNRF1Q8ND25 227 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 SPRY4Q9C004 299 aa7.06□□□□□ -1.28
SMARCE1-207ENST00000469334 IGHV3OR15-7A0A075B7D8 119 aa7.05□□□□□ -1.28
SMARCE1-207ENST00000469334 TMSB15BA0A087X1C1 80 aa7.05□□□□□ -1.28
SMARCE1-207ENST00000469334 LINC01548A6NM66 108 aa7.05□□□□□ -1.28
SMARCE1-207ENST00000469334 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
SMARCE1-207ENST00000469334 P0DMU3 169 aa7.05□□□□□ -1.28
SMARCE1-207ENST00000469334 FAM231AP0DMU4 169 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms