RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CHEK1O14757 476 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF207O43670 478 aaKnown RBP7.17□□□□□ -1.26
SMC1A-205ENST00000469129 IGLV2-11P01706 119 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 TRBV12-3P01733 135 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 MT-ND6P03923 174 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 TRGC2P03986 189 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 ACTL10Q5JWF8 245 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 SAPCD1Q5SSQ6 148 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 GPHB5Q86YW7 130 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 NUDT10Q8NFP7 164 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 NUDT11Q96G61 164 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 UBE2E2Q96LR5 201 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 NAT8BQ9UHF3 227 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 SMAD5-AS1Q9Y6J3 95 aa7.17□□□□□ -1.26
SMC1A-205ENST00000469129 FLNAP21333 2647 aaKnown RBP7.16□□□□□ -1.26
SMC1A-205ENST00000469129 SMIM27A0A1W2PRY6 76 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 FAM231BA6NCW3 169 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 IZUMO1RA6ND01 250 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 A8MWL6 223 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 A8MWP6 167 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 M0R3E3 92 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 RASL11AQ6T310 242 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 C8orf86Q6ZUL3 223 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 REC114Q7Z4M0 266 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 ATP5L2Q7Z4Y8 100 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 TSKUQ8WUA8 353 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 GFRA4Q9GZZ7 299 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 SAV1Q9H4B6 383 aaPredicted RBP7.16□□□□□ -1.26
SMC1A-205ENST00000469129 ACANP16112 2415 aa7.16□□□□□ -1.26
SMC1A-205ENST00000469129 MAP1AP78559 2803 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-205ENST00000469129 TRAV8-1A0A0A6YYK1 113 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 IGHV3-66A0A0C4DH42 116 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 C19orf71A6NCJ1 209 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 UBE2CO00762 179 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BKO60814 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BJP06899 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 FOSL1P15407 271 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BOP23527 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BBP33778 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BDP58876 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BCP62807 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST2H2BEQ16778 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-205ENST00000469129 UNQ9165/PRO28630Q6UXU0 137 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 LCNL1Q6ZST4 164 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 ZNF418Q8TF45 676 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BHQ93079 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 SGK494Q96LW2 274 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BNQ99877 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 HIST1H2BMQ99879 126 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 TRAPPC1Q9Y5R8 145 aa7.15□□□□□ -1.26
SMC1A-205ENST00000469129 IGHV3OR16-13A0A075B7E8 117 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 IGKV2-40A0A087WW87 121 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-205ENST00000469129 IGHV3-49A0A0A0MS15 119 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 IGHV3-74A0A0B4J1X5 117 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 XKRY2A2RUG3 117 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 C5orf52A6NGY3 159 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 NPIPB6E9PJ23 425 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 LGALS9O00182 355 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 IGKV2D-40P01614 121 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-205ENST00000469129 HLA-DQA1P01909 254 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 APOHP02749 345 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-205ENST00000469129 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 SNRPEP62304 92 aaKnown RBP7.14□□□□□ -1.27
SMC1A-205ENST00000469129 TMEM78Q5T7P6 136 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 Q6AWC8 147 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 LCN12Q6JVE5 192 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 COX8CQ7Z4L0 72 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 KLHDC1Q8N7A1 406 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 FRZBQ92765 325 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 JMJD8Q96S16 334 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 NRN1Q9NPD7 142 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 SMPXQ9UHP9 88 aa7.14□□□□□ -1.27
SMC1A-205ENST00000469129 M0QZ24 198 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
SMC1A-205ENST00000469129 SRD5A1P18405 259 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 ID1P41134 155 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 TCL1AP56279 114 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 RPS20P60866 119 aaKnown RBP7.13□□□□□ -1.27
SMC1A-205ENST00000469129 FABP9Q0Z7S8 132 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 SMUG1Q53HV7 270 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 FAM162BQ5T6X4 162 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 Q6ZSV7 163 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 WIPF2Q8TF74 440 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-205ENST00000469129 C4orf3Q8WVX3 66 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 DUX5Q96PT3 197 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 PRR25Q96S07 402 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 NEU1Q99519 415 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 SMR3AQ99954 134 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 RHPN1-AS1Q9BWJ2 59 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 MTORP42345 2549 aa7.13□□□□□ -1.27
SMC1A-205ENST00000469129 TRAV8-2A0A0B4J237 113 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 FAM181BA6NEQ2 426 aa7.12□□□□□ -1.27
SMC1A-205ENST00000469129 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms