RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RXFP4Q8TDU9 374 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 DCANP1Q8TF63 244 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 PCNPQ8WW12 178 aaKnown RBP6.09□□□□□ -1.43
HDAC6-216ENST00000468949 ZNF503Q96F45 646 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 C17orf77Q96MU5 243 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 EIF5A2Q9GZV4 153 aaKnown RBP6.09□□□□□ -1.43
HDAC6-216ENST00000468949 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.43
HDAC6-216ENST00000468949 PPP1R14DQ9NXH3 145 aa6.09□□□□□ -1.43
HDAC6-216ENST00000468949 A0A1W2PRE2 83 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 PGPA6NDG6 321 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 C11orf94C9JXX5 98 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 PAGE4O60829 102 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 NMBP08949 121 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 BCL2P10415 239 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 PSG3Q16557 428 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 HAGHQ16775 308 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 C5orf17Q8NAS9 161 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 OR10J6PQ8NGY7 276 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 RPUSD4Q96CM3 377 aaKnown RBP6.08□□□□□ -1.44
HDAC6-216ENST00000468949 MRPL53Q96EL3 112 aaKnown RBP6.08□□□□□ -1.44
HDAC6-216ENST00000468949 TCEAL7Q9BRU2 100 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 TUBA4BQ9H853 241 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
HDAC6-216ENST00000468949 SERTM2A0A1B0GWG4 89 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 FAM74A7A6NL05 159 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 SOCS3O14543 225 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 RGS13O14921 159 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 DUSP14O95147 198 aaKnown RBP6.07□□□□□ -1.44
HDAC6-216ENST00000468949 NDUFB4O95168 129 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 CD7P09564 240 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 AKR1C3P42330 323 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 SUMO1P63165 101 aaKnown RBP6.07□□□□□ -1.44
HDAC6-216ENST00000468949 IFITM2Q01629 132 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 MEF2BQ02080 365 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-216ENST00000468949 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-216ENST00000468949 TOR2AQ5JU69 321 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 CLLU1Q5K131 121 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 FOXI2Q6ZQN5 318 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 STHQ8IWL8 128 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 FAM24BQ8N5W8 94 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 PRR25Q96S07 402 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 TXNDC17Q9BRA2 123 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 VAX2Q9UIW0 290 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 YTHDF2Q9Y5A9 579 aaKnown RBP6.07□□□□□ -1.44
HDAC6-216ENST00000468949 NOTCH1P46531 2555 aa6.07□□□□□ -1.44
HDAC6-216ENST00000468949 TRAV8-2A0A0B4J237 113 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 RBFOX3A6NFN3 312 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 GGTLC3B5MD39 225 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 M0R3E3 92 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 PDE6DO43924 150 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 ATP5G3P48201 142 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 CNN1P51911 297 aaKnown RBP6.06□□□□□ -1.44
HDAC6-216ENST00000468949 CEBPGP53567 150 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 UBE2G1P62253 170 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 CCL20P78556 96 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 EGFEM1PQ0D2K5 195 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 PEA15Q15121 130 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 ODF3L2Q3SX64 289 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 ACTL10Q5JWF8 245 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 TMEM78Q5T7P6 136 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 GOLT1AQ6ZVE7 132 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 APRG1Q8IVJ8 170 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 CYB561D1Q8N8Q1 229 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 OR4B1Q8NGF8 309 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 SUN5Q8TC36 379 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 HIST1H2BAQ96A08 127 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 FAM110AQ9BQ89 295 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 ATG101Q9BSB4 218 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 SRD5A3Q9H8P0 318 aa6.06□□□□□ -1.44
HDAC6-216ENST00000468949 IGKV2-40A0A087WW87 121 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-216ENST00000468949 LOC102723971A0A1B0GUV8 181 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 KNCNA6PVL3 124 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 ZNF705FA8MVS1 300 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-216ENST00000468949 PEX7O00628 323 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 IGKV2D-40P01614 121 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-216ENST00000468949 NUTF2P61970 127 aaKnown RBP6.05□□□□□ -1.44
HDAC6-216ENST00000468949 GNG5P63218 68 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 OR8A1Q8NGG7 326 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 LYPD6BQ8NI32 183 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 C20orf173Q96LM9 149 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 TREM1Q9NP99 234 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 EPDR1Q9UM22 224 aa6.05□□□□□ -1.44
HDAC6-216ENST00000468949 SCO2A0A1W2PP80 73 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 RBAKDNA6NC62 111 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 FBLL1A6NHQ2 334 aaKnown RBP6.04□□□□□ -1.44
HDAC6-216ENST00000468949 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 IGKV3-20P01619 116 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 TCRAP04437 139 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 HLA-DRB4P13762 266 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 KRTAP10-11P60412 298 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 PMS2P11Q13670 270 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 ZNF506Q5JVG8 444 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 DEFB125Q8N687 156 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 ARL6IP6Q8N6S5 226 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 FMC1Q96HJ9 113 aa6.04□□□□□ -1.44
HDAC6-216ENST00000468949 WFDC10AQ9H1F0 79 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms