RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 RBP2P50120 134 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 CAV3P56539 151 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 INSL4Q14641 139 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 PIGYQ3MUY2 71 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 DEFB121Q5J5C9 76 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 FAM104BQ5XKR9 115 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM42Q69YG0 159 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF880Q6PDB4 577 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 CD200R1LQ6Q8B3 271 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM144Q7Z5S9 345 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 DAZ4Q86SG3 579 aaKnown RBP2.32□□□□□ -2.04
GPNMB-207ENST00000468723 OSR2Q8N2R0 312 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF561Q8N587 486 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 OR4C13Q8NGP0 309 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 OR13D1Q8NGV5 346 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 NEK7Q8TDX7 302 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 TNFAIP8L1Q8WVP5 186 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 C12orf43Q96C57 262 aaKnown RBP2.32□□□□□ -2.04
GPNMB-207ENST00000468723 PACRGQ96M98 296 aaPredicted RBP2.32□□□□□ -2.04
GPNMB-207ENST00000468723 SHANK2-AS3Q9BTD1 123 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 MRPS26Q9BYN8 205 aaKnown RBP2.32□□□□□ -2.04
GPNMB-207ENST00000468723 BANF2Q9H503 90 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 DAZ1Q9NQZ3 744 aaKnown RBP2.32□□□□□ -2.04
GPNMB-207ENST00000468723 BABAM2Q9NXR7 383 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 RASL12Q9NYN1 266 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 ALG5Q9Y673 324 aa2.32□□□□□ -2.04
GPNMB-207ENST00000468723 MXRA5Q9NR99 2828 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 hADV38S2A0JD32 116 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 OR4C45A6NMZ5 311 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ODF3BA8MYP8 253 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF736B4DX44 427 aaPredicted RBP2.31□□□□□ -2.04
GPNMB-207ENST00000468723 J3QRK9 145 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 K7ERS5 55 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 MFNGO00587 321 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 GEMIN2O14893 280 aaKnown RBP2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ATP5HO75947 161 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 HBZP02008 142 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 CXCL2P19875 107 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 CCL1P22362 96 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
GPNMB-207ENST00000468723 INPP1P49441 399 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 CEBPGP53567 150 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 H2BFSP57053 126 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 CDK5R1Q15078 307 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 RSU1Q15404 277 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 KISS1Q15726 138 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 SNCBQ16143 134 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 DEFB136Q30KP8 78 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ACSM3Q53FZ2 586 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM244Q5VVB8 128 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 OR10K2Q6IF99 312 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 SCGB1D4Q6XE38 83 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 AMN1Q8IY45 258 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ZFP82Q8N141 532 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM86BQ8N661 226 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ACBD7Q8N6N7 88 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 BPIFB6Q8NFQ5 453 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 OR4K15Q8NH41 348 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 OR5AK2Q8NH90 309 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 RPS4Y2Q8TD47 263 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 DNAJC9Q8WXX5 260 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 SPIN2AQ99865 258 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 SPIN2BQ9BPZ2 258 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 C9orf16Q9BUW7 83 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 TMEM133Q9H2Q1 129 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 C16orf95Q9H693 158 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 VSIRQ9H7M9 311 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 HES4Q9HCC6 221 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 IDI2-AS1Q9NZ38 188 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 HHLA2Q9UM44 414 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
GPNMB-207ENST00000468723 FBN3Q75N90 2809 aa2.31□□□□□ -2.04
GPNMB-207ENST00000468723 WNK1Q9H4A3 2382 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 TRGV10A0A0A0MS01 117 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ODAMA1E959 279 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 LEUTXA8MZ59 168 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 B4DEV8 164 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 IGLL5B9A064 214 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 BUB1B-PAK6H3BSN5 160 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 J3QRE1 110 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 M0R036 132 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 SDCBPO00560 298 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-207ENST00000468723 SULT1B1O43704 296 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 NOS1APO75052 506 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-207ENST00000468723 SULT1C4O75897 302 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 OR7C1O76099 320 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-207ENST00000468723 FSTL3O95633 263 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 IGKV1D-33P01593 117 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 IGKV1-33P01594 117 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ISG15P05161 165 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ATP5G1P05496 136 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 PTHLHP12272 177 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ORM2P19652 201 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 PSMA1P25786 263 aaKnown RBP2.3□□□□□ -2.04
GPNMB-207ENST00000468723 ZNF93P35789 620 aaPredicted RBP2.3□□□□□ -2.04
GPNMB-207ENST00000468723 MAP2K4P45985 399 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 GABARAPL2P60520 117 aa2.3□□□□□ -2.04
GPNMB-207ENST00000468723 SNRPGP62308 76 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms