RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HAX1O00165 279 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 TCF21O43680 179 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 NDUFA7O95182 113 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 LTAP01374 205 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 S100PP25815 95 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 PSG3Q16557 428 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 Q86TA4 180 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 C1QL4Q86Z23 238 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 YPEL4Q96NS1 127 aa14.44□□□□□ -0.1
SMC4-209ENST00000468653 TRBV6-1A0A0K0K1D8 114 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 LINC01619G3V211 115 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 IGLV2-11P01706 119 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 FLI1Q01543 452 aaPredicted RBP14.43□□□□□ -0.1
SMC4-209ENST00000468653 LCN12Q6JVE5 192 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 RNF182Q8N6D2 247 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 OR11H1Q8NG94 326 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 WFDC12Q8WWY7 111 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 C16orf92Q96LL3 132 aa14.43□□□□□ -0.1
SMC4-209ENST00000468653 TMEM213A2RRL7 107 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 ZNF705FA8MVS1 300 aaPredicted RBP14.42□□□□□ -0.1
SMC4-209ENST00000468653 A8MWP6 167 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 EDN2P20800 178 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 C11orf44Q8N8P7 122 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 OR1N2Q8NGR9 330 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 RNASE7Q9H1E1 156 aaKnown RBP14.42□□□□□ -0.1
SMC4-209ENST00000468653 PSG8Q9UQ74 426 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 HIVEP1P15822 2718 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 IGKV2-40A0A087WW87 121 aaPredicted RBP14.42□□□□□ -0.1
SMC4-209ENST00000468653 IGKV2D-40P01614 121 aaPredicted RBP14.42□□□□□ -0.1
SMC4-209ENST00000468653 CD28P10747 220 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 SLURP1P55000 103 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 KLF5Q13887 457 aaPredicted RBP14.42□□□□□ -0.1
SMC4-209ENST00000468653 OSTCQ9NRP0 149 aa14.42□□□□□ -0.1
SMC4-209ENST00000468653 TGIF2-C20orf24A0A0A6YYL0 155 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 TRAV8-2A0A0B4J237 113 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 CRLF1O75462 422 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 IBA57Q5T440 356 aaKnown RBP14.41□□□□□ -0.1
SMC4-209ENST00000468653 HIST2H2BDQ6DRA6 164 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 PRR27Q6MZM9 219 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 KCNIP4Q6PIL6 250 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 MLST8Q9BVC4 326 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 NRN1Q9NPD7 142 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 BIN3Q9NQY0 253 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 CLEC5AQ9NY25 188 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 ZFP30Q9Y2G7 519 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 RNF114Q9Y508 228 aa14.41□□□□□ -0.1
SMC4-209ENST00000468653 PFN1P07737 140 aaKnown RBP14.4□□□□□ -0.1
SMC4-209ENST00000468653 RAB5AP20339 215 aa14.4□□□□□ -0.1
SMC4-209ENST00000468653 TCF24Q7RTU0 167 aa14.4□□□□□ -0.1
SMC4-209ENST00000468653 TMEM183AQ8IXX5 376 aa14.4□□□□□ -0.1
SMC4-209ENST00000468653 DUX3Q96PT4 197 aa14.4□□□□□ -0.1
SMC4-209ENST00000468653 IGKV3-7A0A075B6H7 116 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 A0A1W2PRX2 142 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 CXCL1P09341 107 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 MRPL53Q96EL3 112 aaKnown RBP14.39□□□□□ -0.11
SMC4-209ENST00000468653 SELENOKQ9Y6D0 94 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 FBLL1A6NHQ2 334 aaKnown RBP14.39□□□□□ -0.11
SMC4-209ENST00000468653 IMMP2LQ96T52 175 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 V9GYV3 84 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 NF1P21359 2839 aa14.39□□□□□ -0.11
SMC4-209ENST00000468653 C2orf70A6NJV1 201 aa14.38□□□□□ -0.11
SMC4-209ENST00000468653 CBLN1P23435 193 aa14.38□□□□□ -0.11
SMC4-209ENST00000468653 CITED2Q99967 270 aaPredicted RBP14.38□□□□□ -0.11
SMC4-209ENST00000468653 TSSC4Q9Y5U2 329 aaPredicted RBP14.38□□□□□ -0.11
SMC4-209ENST00000468653 ZNF705GA8MUZ8 300 aaPredicted RBP14.37□□□□□ -0.11
SMC4-209ENST00000468653 M0QZ24 198 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 FAM231DQ6ZW35 169 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 FAM210BQ96KR6 192 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 VGLL1Q99990 258 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 IL36BQ9NZH7 164 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 TRBV24-1A0A075B6N3 115 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 A0A1W2PPQ1 181 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 RBAKDNA6NC62 111 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 PRAC2D3DTV9 90 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 SOCS3O14543 225 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 FAM3BP58499 235 aaPredicted RBP14.37□□□□□ -0.11
SMC4-209ENST00000468653 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
SMC4-209ENST00000468653 NUDT10Q8NFP7 164 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 NUDT11Q96G61 164 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 ASCL2Q99929 193 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 PEMTQ9UBM1 199 aa14.37□□□□□ -0.11
SMC4-209ENST00000468653 GATCO43716 136 aaKnown RBP14.36□□□□□ -0.11
SMC4-209ENST00000468653 FOLR2P14207 255 aa14.36□□□□□ -0.11
SMC4-209ENST00000468653 RPS10P46783 165 aaKnown RBP14.36□□□□□ -0.11
SMC4-209ENST00000468653 FOXL1Q12952 345 aa14.36□□□□□ -0.11
SMC4-209ENST00000468653 GBGT1Q8N5D6 347 aa14.36□□□□□ -0.11
SMC4-209ENST00000468653 ZNF738Q8NE65 137 aa14.36□□□□□ -0.11
SMC4-209ENST00000468653 DAZAP1Q96EP5 407 aaKnown RBP14.36□□□□□ -0.11
SMC4-209ENST00000468653 FN1P02751 2386 aaKnown RBP14.36□□□□□ -0.11
SMC4-209ENST00000468653 NSD1Q96L73 2696 aaPredicted RBP14.36□□□□□ -0.11
SMC4-209ENST00000468653 PROK1P58294 105 aa14.35□□□□□ -0.11
SMC4-209ENST00000468653 ERCC8Q13216 396 aa14.35□□□□□ -0.11
SMC4-209ENST00000468653 SAPCD1Q5SSQ6 148 aa14.35□□□□□ -0.11
SMC4-209ENST00000468653 RAX2Q96IS3 184 aa14.35□□□□□ -0.11
SMC4-209ENST00000468653 ZNF492Q9P255 531 aa14.35□□□□□ -0.11
SMC4-209ENST00000468653 MLXQ9UH92 298 aa14.35□□□□□ -0.11
SMC4-209ENST00000468653 SAMD13Q5VXD3 122 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 OR9G4Q8NGQ1 327 aa14.34□□□□□ -0.11
SMC4-209ENST00000468653 DLX4Q92988 240 aaPredicted RBP14.34□□□□□ -0.11
SMC4-209ENST00000468653 C20orf173Q96LM9 149 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms