RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 YPEL3P61236 119 aaPredicted RBP6.38□□□□□ -1.39
BRCA1-208ENST00000468300 RHOBP62745 196 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 C19orf24Q9BVV8 132 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 CARHSP1Q9Y2V2 147 aaKnown RBP6.38□□□□□ -1.39
BRCA1-208ENST00000468300 TMEM213A2RRL7 107 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 NPPCP23582 126 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 PSMB8P28062 276 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 FOXE3Q13461 319 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 NAA38Q9BRA0 125 aaKnown RBP6.38□□□□□ -1.39
BRCA1-208ENST00000468300 EIF5A2Q9GZV4 153 aaKnown RBP6.38□□□□□ -1.39
BRCA1-208ENST00000468300 YTHDF2Q9Y5A9 579 aaKnown RBP6.38□□□□□ -1.39
BRCA1-208ENST00000468300 HIVEP1P15822 2718 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 DNAJC9-AS1A6NH13 148 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 CXorf1O96002 111 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 GCHFRP30047 84 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 AMTP48728 403 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 ZNF343Q6P1L6 599 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 SERTAD4Q9NUC0 356 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 TLN2Q9Y4G6 2542 aa6.38□□□□□ -1.39
BRCA1-208ENST00000468300 TRBV12-3P01733 135 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 HSPB1P04792 205 aaKnown RBP6.37□□□□□ -1.39
BRCA1-208ENST00000468300 C10orf113Q5VZT2 155 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 FAM90A2PQ658T7 463 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 DGAT2L7PQ6IED9 249 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 LINC00305Q7Z4B0 112 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 STHQ8IWL8 128 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 SEC11CQ9BY50 192 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 ZFAND3Q9H8U3 227 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 RETNQ9HD89 108 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 ZNF355PQ9NSJ1 428 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 CLPSL1A2RUU4 121 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 FAM223BA6NKX1 122 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 CYSRT1A8MQ03 144 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 H3BUA1 57 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 MRPS12O15235 138 aaKnown RBP6.37□□□□□ -1.39
BRCA1-208ENST00000468300 IGHG4P01861 327 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 ORM2P19652 201 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 PAFAH1B2P68402 229 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
BRCA1-208ENST00000468300 GTF2H5Q6ZYL4 71 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 TCF24Q7RTU0 167 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 NIT1Q86X76 327 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 FAM223AQ8IWN6 122 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 TMEM86BQ8N661 226 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 OR1B1Q8NGR6 318 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 FXYD5Q96DB9 178 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 C17orf77Q96MU5 243 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 MRPL32Q9BYC8 188 aaKnown RBP6.37□□□□□ -1.39
BRCA1-208ENST00000468300 SMDT1Q9H4I9 107 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 PAGE4O60829 102 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 GP9P14770 177 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 PSMB3P49720 205 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 ZNF329Q86UD4 541 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 CYB561D1Q8N8Q1 229 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 OR51G1Q8NGK1 321 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 MYOZ3Q8TDC0 251 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 Q8WTZ3 238 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 SLC35B3Q9H1N7 401 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 VAX2Q9UIW0 290 aa6.37□□□□□ -1.39
BRCA1-208ENST00000468300 TRBV7-1A0A0A6YYK4 115 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 C8orf88P0DMB2 117 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 PYYP10082 97 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 HIST1H1EP10412 219 aaKnown RBP6.36□□□□□ -1.39
BRCA1-208ENST00000468300 ESDP10768 282 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 GPR183P32249 361 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 ATP5G3P48201 142 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 Q56UQ5 140 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 WIPF2Q8TF74 440 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-208ENST00000468300 PBDC1Q9BVG4 233 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 SLC25A39Q9BZJ4 359 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-208ENST00000468300 PPP5D1E7EU14 171 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 G3V4G9 280 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 H3BRN7 92 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 COX7A2P2O60397 106 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 HYPMO75409 117 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 TRGV3P03979 118 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 RAB5AP20339 215 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 MEF2BQ02080 365 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-208ENST00000468300 HIST1H1AQ02539 215 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-208ENST00000468300 CLEC19AQ6UXS0 136 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 MANBALQ9NQG1 85 aa6.36□□□□□ -1.39
BRCA1-208ENST00000468300 TECRQ9NZ01 308 aaKnown RBP6.36□□□□□ -1.39
BRCA1-208ENST00000468300 KIR2DL5BA0A0G2JN68 375 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 KIR2DL5BA0A0G2JPC4 375 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 GZMBP10144 247 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 SONP18583 2426 aaKnown RBP6.35□□□□□ -1.39
BRCA1-208ENST00000468300 MYCNOSP40205 109 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 FAM3BP58499 235 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-208ENST00000468300 RPS20P60866 119 aaKnown RBP6.35□□□□□ -1.39
BRCA1-208ENST00000468300 LYZP61626 148 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 ATP5G2Q06055 141 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 ZNF415Q09FC8 603 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 TOMM20LQ6UXN7 152 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 KIR2DL5AQ8N109 375 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 OR5AU1Q8NGC0 362 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 KIR2DL5BQ8NHK3 375 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 RNF183Q96D59 192 aa6.35□□□□□ -1.39
BRCA1-208ENST00000468300 SPAG8Q99932 426 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-208ENST00000468300 CLDN34H7C241 214 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms