RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 RNF2Q99496 336 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 MARVELD1Q9BSK0 173 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 PBDC1Q9BVG4 233 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 RHPN1-AS1Q9BWJ2 59 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 MRPL27Q9P0M9 148 aaKnown RBP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 CACFD1Q9UGQ2 172 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 SMPXQ9UHP9 88 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 ALG5Q9Y673 324 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 IGKV1OR2-108A0A075B7D4 117 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 IGSF23A1L1A6 192 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 C7orf66A4D0T2 115 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 SNRPGP15A8MWD9 76 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 CST7O76096 145 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 IL4P05112 153 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 RD3LP0DJH9 198 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 GPX4P36969 197 aaPredicted RBP3.69□□□□□ -1.82
U2AF1-207ENST00000468039 NUP62P37198 522 aaPredicted RBP3.69□□□□□ -1.82
U2AF1-207ENST00000468039 CAV2P51636 162 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 LYZP61626 148 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 AKR1C1Q04828 323 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 TMEM14EPQ6UXP3 125 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 Q6ZVQ6 151 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 TCF24Q7RTU0 167 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 TRPT1Q86TN4 253 aaKnown RBP3.69□□□□□ -1.82
U2AF1-207ENST00000468039 OR51G1Q8NGK1 321 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 OR2K2Q8NGT1 345 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 Q8WTZ3 238 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 SMIM8Q96KF7 97 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 C2orf50Q96LR7 162 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 METTL26Q96S19 204 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 GINS3Q9BRX5 216 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 C11orf1Q9H5F2 150 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 OR5AC2Q9NZP5 309 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 CSDC2Q9Y534 153 aaKnown RBP3.69□□□□□ -1.82
U2AF1-207ENST00000468039 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
U2AF1-207ENST00000468039 TGP01266 2768 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 TRAV30A0A087WSZ9 112 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 OR11H12B2RN74 326 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 PTTG1O95997 202 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 AMBPP02760 352 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 CXCL3P19876 107 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 NPPCP23582 126 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 P2RY1P47900 373 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 H2BFSP57053 126 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 YPEL3P61236 119 aaPredicted RBP3.68□□□□□ -1.82
U2AF1-207ENST00000468039 SLC38A11Q08AI6 406 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 IL15RAQ13261 267 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 FCN2Q15485 313 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 ZNF876PQ49A33 203 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 LAMTOR1Q6IAA8 161 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 ATRAIDQ6UW56 229 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 SBSPONQ8IVN8 264 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 FAM24BQ8N5W8 94 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 STXBP6Q8NFX7 210 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 B9D2Q9BPU9 175 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 MS4A6AQ9H2W1 248 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 VSIRQ9H7M9 311 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 RETNQ9HD89 108 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 DOK5Q9P104 306 aa3.68□□□□□ -1.82
U2AF1-207ENST00000468039 COL7A1Q02388 2944 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 KMT2CQ8NEZ4 4911 aaKnown RBP3.67□□□□□ -1.82
U2AF1-207ENST00000468039 DNAH1Q9P2D7 4330 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 UBE2L5PA0A1B0GUS4 154 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 RBMY1BA6NDE4 496 aaKnown RBP3.67□□□□□ -1.82
U2AF1-207ENST00000468039 RBMY1EA6NEQ0 496 aaKnown RBP3.67□□□□□ -1.82
U2AF1-207ENST00000468039 DEDDO75618 318 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 RBMY1DP0C7P1 496 aaKnown RBP3.67□□□□□ -1.82
U2AF1-207ENST00000468039 ORM2P19652 201 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 PVALBP20472 110 aaPredicted RBP3.67□□□□□ -1.82
U2AF1-207ENST00000468039 CRYBB3P26998 211 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 TAS2R30P59541 319 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 RGS21Q2M5E4 152 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 KCNIP4Q6PIL6 250 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 CYP2G1PQ6ZSU1 146 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 APRG1Q8IVJ8 170 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 OR10P1Q8NGE3 313 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 PPP1R1CQ8WVI7 109 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 PPP1R14BQ96C90 147 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 TRGV9Q99603 122 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 SCRT1Q9BWW7 348 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 NMES1Q9C002 83 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 TUBA4BQ9H853 241 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 SCRT2Q9NQ03 307 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 LYRM2Q9NU23 88 aaPredicted RBP3.67□□□□□ -1.82
U2AF1-207ENST00000468039 RABAC1Q9UI14 185 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 SORL1Q92673 2214 aa3.67□□□□□ -1.82
U2AF1-207ENST00000468039 OR4C46A6NHA9 309 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 DNASE2O00115 360 aaPredicted RBP3.66□□□□□ -1.82
U2AF1-207ENST00000468039 FABP1P07148 127 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 ZNF688P0C7X2 276 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 LINC00869P0C866 280 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 PRB4P10163 310 aaPredicted RBP3.66□□□□□ -1.82
U2AF1-207ENST00000468039 RPL35AP18077 110 aaKnown RBP3.66□□□□□ -1.82
U2AF1-207ENST00000468039 C4BPBP20851 252 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 EIF2B2P49770 351 aaKnown RBP3.66□□□□□ -1.82
U2AF1-207ENST00000468039 SULT1A1P50225 295 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 DEFB131AP59861 70 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 DEFB1P60022 68 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 PLP1P60201 277 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms