RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, human

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-209	ENST00000467762	TRBV19	A0A075B6N1	114 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.13	□□□□□ -1.75
RIF1-209	ENST00000467762		A0A1B0GUS0	222 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762		A0A1B0GUT8	65 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762		H3BRN7	92 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762		K7ENP7	123 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	SPINK4	O60575	86 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	NDUFA3	O95167	84 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	LEPROTL1	O95214	131 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	CNIH1	O95406	144 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	CT45A10	P0DMU9	189 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF25	P17030	456 aa	Predicted RBP	4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	NTF3	P20783	257 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	UQCRFS1	P47985	274 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	KLK9	Q2XQG4	91 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	KIAA1644	Q3SXP7	199 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF672	Q499Z4	452 aa	Predicted RBP	4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	HCP5	Q6MZN7	132 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762		Q6ZN92	141 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF493	Q6ZR52	646 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762		Q86TA4	180 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	MUC15	Q8N387	334 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	TTC9C	Q8N5M4	171 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	BLNK	Q8WV28	456 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	LINC00479	Q96M42	142 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	WWC2-AS2	Q96NR7	200 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	RCHY1	Q96PM5	261 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	AAMDC	Q9H7C9	122 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	KLK9	Q9UKQ9	250 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	FAM186A	A6NE01	2351 aa		4.13	□□□□□ -1.75
RIF1-209	ENST00000467762	C2orf70	A6NJV1	201 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	RHOD	O00212	210 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	FCN3	O75636	299 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	NDUFB8	O95169	186 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	HLA-DRB1	P01911	266 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	FRMD6-AS1	P0C7T7	363 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	RPL7	P18124	248 aa	Known RBP	4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	PRTN3	P24158	256 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	TSPO	P30536	169 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	LYZ	P61626	148 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	GNG5	P63218	68 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	SLC35B1	P78383	322 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	SSBP2	P81877	361 aa	Predicted RBP	4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	DIAPH2-AS1	Q14236	149 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	PSG3	Q16557	428 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	C10orf55	Q5SWW7	151 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	GDF5OS	Q5U4N7	250 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF562	Q6V9R5	426 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	C12orf54	Q6X4T0	127 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF491	Q8N8L2	437 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF738	Q8NE65	137 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	OR1N2	Q8NGR9	330 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	TMEM208	Q9BTX3	173 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	CLEC5A	Q9NY25	188 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	MRPL36	Q9P0J6	103 aa	Known RBP	4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNRD1	Q9P1U0	126 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	PSG8	Q9UQ74	426 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	PRUNE2	Q8WUY3	3088 aa		4.12	□□□□□ -1.75
RIF1-209	ENST00000467762	TNC	P24821	2201 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	GAGE12B	A1L429	117 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	RBAKDN	A6NC62	111 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	GAGE12H	A6NDE8	117 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	ODF3B	A8MYP8	253 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	VWC2L	B2RUY7	222 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762		F2Z2F3	143 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	SYS1-DBNDD2	H3BUS1	97 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762		K7EIM0	57 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	GNG7	O60262	68 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	CA1	P00915	261 aa	Predicted RBP	4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	IGKV1-17	P01599	117 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	IGLV2-11	P01706	119 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	APOH	P02749	345 aa	Predicted RBP	4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	PPBP	P02775	128 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	EBI3	Q14213	229 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	C5orf64	Q2M2E5	130 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	TDRG1	Q3Y452	100 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	GOLT1A	Q6ZVE7	132 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	TCF24	Q7RTU0	167 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	PRNT	Q86SH4	94 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	FAM19A2	Q8N3H0	131 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	PRSS33	Q8NF86	280 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	OR9G4	Q8NGQ1	327 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	OR10AG1	Q8NH19	301 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	GTSF1	Q8WW33	167 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF414	Q96IQ9	312 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	RITA1	Q96K30	269 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	PGLYRP4	Q96LB8	373 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	FBXL15	Q9H469	300 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	CUL9	Q8IWT3	2517 aa		4.11	□□□□□ -1.75
RIF1-209	ENST00000467762	IGLV11-55	A0A075B6I3	123 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	IGHV3-72	A0A0B4J1Y9	119 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	TMEM189	A5PLL7	270 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	OR4C46	A6NHA9	309 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	TIMM23	O14925	209 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	MRPS12	O15235	138 aa	Known RBP	4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	SIVA1	O15304	175 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	FAM106CP	P0CH98	169 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	COL8A2	P25067	703 aa		4.1	□□□□□ -1.75
RIF1-209	ENST00000467762	ZNF415	Q09FC8	603 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms