RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 K7EQM0 130 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 RPS10P46783 165 aaKnown RBP14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 FLI1Q01543 452 aaPredicted RBP14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 PRR27Q6MZM9 219 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 IMMP2LQ96T52 175 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 ASCL2Q99929 193 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 SLC50A1Q9BRV3 221 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 RHPN1-AS1Q9BWJ2 59 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 HIVEP1P15822 2718 aa14.3□□□□□ -0.12
CHRNA4-203ENST00000467563 IGKV2-40A0A087WW87 121 aaPredicted RBP14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 A0A1W2PS18 150 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 CHEK1O14757 476 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 IGKV2D-40P01614 121 aaPredicted RBP14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 ARL6IP6Q8N6S5 226 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 GRAMD2BQ96HH9 432 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 PSG8Q9UQ74 426 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 FOXL1Q12952 345 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 HIST2H2BDQ6DRA6 164 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 LCN12Q6JVE5 192 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 LINC00322Q6ZN03 302 aaPredicted RBP14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 TMEM183AQ8IXX5 376 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 WIPF2Q8TF74 440 aaPredicted RBP14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 MLXQ9UH92 298 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 SMPXQ9UHP9 88 aa14.29□□□□□ -0.12
CHRNA4-203ENST00000467563 CDX1P47902 265 aaPredicted RBP14.28□□□□□ -0.12
CHRNA4-203ENST00000467563 MEOX2P50222 304 aa14.28□□□□□ -0.12
CHRNA4-203ENST00000467563 KCNIP4Q6PIL6 250 aa14.28□□□□□ -0.12
CHRNA4-203ENST00000467563 IL36BQ9NZH7 164 aa14.28□□□□□ -0.12
CHRNA4-203ENST00000467563 TMEM213A2RRL7 107 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 HOXD3P31249 432 aaPredicted RBP14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 DEFB136Q30KP8 78 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 FAM231DQ6ZW35 169 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 ZFP82Q8N141 532 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 NUDT10Q8NFP7 164 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 NUDT11Q96G61 164 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 UFC1Q9Y3C8 167 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 SELENOKQ9Y6D0 94 aa14.27□□□□□ -0.12
CHRNA4-203ENST00000467563 SERTM2A0A1B0GWG4 89 aa14.27□□□□□ -0.13
CHRNA4-203ENST00000467563 PRAC2D3DTV9 90 aa14.27□□□□□ -0.13
CHRNA4-203ENST00000467563 SYNJ2BPP57105 145 aa14.27□□□□□ -0.13
CHRNA4-203ENST00000467563 INAFM1C9JVW0 142 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 VGLL1Q99990 258 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 ZFP30Q9Y2G7 519 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 ZNF705GA8MUZ8 300 aaPredicted RBP14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 C1orf196B1AJZ1 125 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 CA1P00915 261 aaPredicted RBP14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 KHDC1LQ5JSQ8 128 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 REC114Q7Z4M0 266 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 LINC01006Q8NI28 216 aa14.26□□□□□ -0.13
CHRNA4-203ENST00000467563 NSD1Q96L73 2696 aaPredicted RBP14.25□□□□□ -0.13
CHRNA4-203ENST00000467563 C4orf3Q8WVX3 66 aa14.25□□□□□ -0.13
CHRNA4-203ENST00000467563 C16orf95Q9H693 158 aa14.25□□□□□ -0.13
CHRNA4-203ENST00000467563 SETD2Q9BYW2 2564 aaPredicted RBP14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 A8MWP6 167 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 SOCS3O14543 225 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 ZC2HC1AQ96GY0 325 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 C16orf92Q96LL3 132 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 C19orf71A6NCJ1 209 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 LGALS9O00182 355 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 RPL11P62913 178 aaKnown RBP14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 NRN1Q9NPD7 142 aa14.24□□□□□ -0.13
CHRNA4-203ENST00000467563 IGKV3-7A0A075B6H7 116 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 LOC105371267A0A1B0GV96 52 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 GATCO43716 136 aaKnown RBP14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 SLURP1P55000 103 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 RAB5BP61020 215 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 KLF5Q13887 457 aaPredicted RBP14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 Q8TAT8 98 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 C20orf173Q96LM9 149 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 C8orf49Q96NF6 230 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 ZNF492Q9P255 531 aa14.23□□□□□ -0.13
CHRNA4-203ENST00000467563 TRGC2P03986 189 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 TYMSP04818 313 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 FOSL1P15407 271 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 C11orf44Q8N8P7 122 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 KLHL30-AS1Q8NEE0 82 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 OR11H1Q8NG94 326 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 MRPL53Q96EL3 112 aaKnown RBP14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 DUX3Q96PT4 197 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 SRD5A3Q9H8P0 318 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 BIN3Q9NQY0 253 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 TCL1AP56279 114 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 ERCC8Q13216 396 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 TCF24Q7RTU0 167 aa14.22□□□□□ -0.13
CHRNA4-203ENST00000467563 SMIM27A0A1W2PRY6 76 aa14.21□□□□□ -0.13
CHRNA4-203ENST00000467563 LINC01619G3V211 115 aa14.21□□□□□ -0.13
CHRNA4-203ENST00000467563 GBGT1Q8N5D6 347 aa14.21□□□□□ -0.13
CHRNA4-203ENST00000467563 PRR25Q96S07 402 aa14.21□□□□□ -0.13
CHRNA4-203ENST00000467563 FN1P02751 2386 aaKnown RBP14.21□□□□□ -0.13
CHRNA4-203ENST00000467563 CD28P10747 220 aa14.21□□□□□ -0.14
CHRNA4-203ENST00000467563 CRIP1P50238 77 aa14.21□□□□□ -0.14
CHRNA4-203ENST00000467563 GPR61Q9BZJ8 451 aa14.21□□□□□ -0.14
CHRNA4-203ENST00000467563 RBAKDNA6NC62 111 aa14.2□□□□□ -0.14
CHRNA4-203ENST00000467563 FBLL1A6NHQ2 334 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-203ENST00000467563 P01737 135 aa14.2□□□□□ -0.14
CHRNA4-203ENST00000467563 OR1N2Q8NGR9 330 aa14.2□□□□□ -0.14
CHRNA4-203ENST00000467563 JMJD8Q96S16 334 aa14.2□□□□□ -0.14
CHRNA4-203ENST00000467563 CLEC5AQ9NY25 188 aa14.2□□□□□ -0.14
CHRNA4-203ENST00000467563 TRAV9-1A0A075B6T8 112 aa14.19□□□□□ -0.14
CHRNA4-203ENST00000467563 C2orf70A6NJV1 201 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms