RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	TMEM167B	Q9NRX6	74 aa		11.5	□□□□□ -0.57
TSSC4-208	ENST00000467308	SMPX	Q9UHP9	88 aa		11.5	□□□□□ -0.57
TSSC4-208	ENST00000467308	ARL2-SNX15	V9GYD0	113 aa		11.5	□□□□□ -0.57
TSSC4-208	ENST00000467308	TRAV5	A0A0B4J249	113 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	GCHFR	P30047	84 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	TAGLN2	P37802	199 aa	Known RBP	11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	C16orf54	Q6UWD8	224 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	OR11H2	Q8NH07	326 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	PCNP	Q8WW12	178 aa	Known RBP	11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	GRAMD2B	Q96HH9	432 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	PAXX	Q9BUH6	204 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	OR51M1	Q9H341	326 aa		11.49	□□□□□ -0.57
TSSC4-208	ENST00000467308	IGHV3OR16-8	A0A075B7F1	116 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	HMGB3	O15347	200 aa	Known RBP	11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	OR7C2	O60412	319 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	CD5	P06127	495 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	HIST1H1E	P10412	219 aa	Known RBP	11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	MEOX2	P50222	304 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	CCL20	P78556	96 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	GLMP	Q8WWB7	406 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	FXYD5	Q96DB9	178 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308	RYR1	P21817	5038 aa		11.48	□□□□□ -0.57
TSSC4-208	ENST00000467308		A0A087X0K7	114 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	CHEK1	O14757	476 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	ZNF207	O43670	478 aa	Known RBP	11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	NDUFS6	O75380	124 aa	Known RBP	11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	APOH	P02749	345 aa	Predicted RBP	11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	IGLC2	P0DOY2	106 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	FGF8	P55075	233 aa	Predicted RBP	11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	NDUFA5	Q16718	116 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	GUK1	Q16774	197 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	LEMD1	Q68G75	181 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	OR8I2	Q8N0Y5	310 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	RHPN1-AS1	Q9BWJ2	59 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	MANBAL	Q9NQG1	85 aa		11.47	□□□□□ -0.57
TSSC4-208	ENST00000467308	RAB19	A4D1S5	217 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	EIF3G	O75821	320 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	IFNA1	P01562	189 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	GALR1	P47211	349 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	UBE2L3	P68036	154 aa	Known RBP	11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	PDE6H	Q13956	83 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	ZNF124	Q15973	351 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	EIF4E3	Q8N5X7	224 aa	Known RBP	11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	FAM210A	Q96ND0	272 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	TXNDC17	Q9BRA2	123 aa		11.46	□□□□□ -0.57
TSSC4-208	ENST00000467308	PKHD1	P08F94	4074 aa		11.46	□□□□□ -0.58
TSSC4-208	ENST00000467308	HELT	A6NFD8	242 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	C11orf94	C9JXX5	98 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	ZNF253	O75346	499 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	NBEAP1	P0C6P0	100 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	PYY	P10082	97 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	LINC00336	Q6ZUF6	198 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	TMPRSS5	Q9H3S3	457 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	SMDT1	Q9H4I9	107 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	APLN	Q9ULZ1	77 aa		11.45	□□□□□ -0.58
TSSC4-208	ENST00000467308	TRBV19	A0A075B6N1	114 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308		A0A1W2PRE2	83 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308		H3BQ15	152 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	CA1	P00915	261 aa	Predicted RBP	11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	OR10J4	P0C629	311 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	BCL2	P10415	239 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	FAM90A2P	Q658T7	463 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	SIGLEC15	Q6ZMC9	328 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	LYPD1	Q8N2G4	141 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	NKX6-2	Q9C056	277 aa	Predicted RBP	11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	GNG13	Q9P2W3	67 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308	FAT2	Q9NYQ8	4349 aa		11.44	□□□□□ -0.58
TSSC4-208	ENST00000467308		A0A1B0GV50	99 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	RBFOX3	A6NFN3	312 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	IGLL5	B9A064	214 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	TFPI2	P48307	235 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	PAFAH1B2	P68402	229 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	ZNF506	Q5JVG8	444 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	SAMD13	Q5VXD3	122 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	C17orf77	Q96MU5	243 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	ZNF586	Q9NXT0	402 aa		11.43	□□□□□ -0.58
TSSC4-208	ENST00000467308	IGHV3OR16-13	A0A075B7E8	117 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	IGHV3-49	A0A0A0MS15	119 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	IGHV3-74	A0A0B4J1X5	117 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	LOC102723971	A0A1B0GUV8	181 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	FAM74A7	A6NL05	159 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	DEFB4A	O15263	64 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	UQCC3	Q6UW78	93 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	IQCF2	Q8IXL9	164 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	ARL6IP6	Q8N6S5	226 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	TCEAL7	Q9BRU2	100 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	VAX2	Q9UIW0	290 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	MUC4	Q99102	2169 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	DNAH2	Q9P225	4427 aa		11.42	□□□□□ -0.58
TSSC4-208	ENST00000467308	IGKV3-7	A0A075B6H7	116 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	IGHV3-66	A0A0C4DH42	116 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	PAGE4	O60829	102 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	NDUFB4	O95168	129 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	MED14OS	P0DP75	135 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	COMMD7	Q86VX2	200 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308		Q8NAQ8	132 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	CLEC5A	Q9NY25	188 aa		11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.41	□□□□□ -0.58
TSSC4-208	ENST00000467308	TRAV2	A0A0B4J234	112 aa		11.4	□□□□□ -0.58
TSSC4-208	ENST00000467308	PSG9	Q00887	426 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms