RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 C7orf71A4D174 169 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF727A8MUV8 499 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 IGLL5B9A064 214 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 RPL36A-HNRNPH2H7BZ11 118 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 M0R378 163 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 GSTZ1O43708 216 aaPredicted RBP2.36□□□□□ -2.03
CCDC58-203ENST00000466854 SLC37A4O43826 429 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 MRPS14O60783 128 aaKnown RBP2.36□□□□□ -2.03
CCDC58-203ENST00000466854 CRYGSP22914 178 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 CRHBPP24387 322 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 TGFBR1P36897 503 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 AQP4P55087 323 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 FOXA1P55317 472 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 PLGLB1Q02325 96 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 UBE2NLQ5JXB2 153 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 C1orf140Q5VVS0 124 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 LCA10Q71F78 164 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 MSRB3Q8IXL7 192 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 RNF175Q8N4F7 328 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 OR4S1Q8NGB4 309 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 FAM57AQ8TBR7 257 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 TOMM6Q96B49 74 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 MS4A6EQ96DS6 147 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 SPIN2AQ99865 258 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 SPIN2BQ9BPZ2 258 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 SLC25A2Q9BXI2 301 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 IMUPQ9GZP8 106 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 COMMD5Q9GZQ3 224 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 PRO1933Q9H354 126 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 RPRMQ9NS64 109 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 MED9Q9NWA0 146 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF443Q9Y2A4 671 aaPredicted RBP2.36□□□□□ -2.03
CCDC58-203ENST00000466854 IER3IP1Q9Y5U9 82 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 CSMD2Q7Z408 3487 aa2.36□□□□□ -2.03
CCDC58-203ENST00000466854 ANKHD1Q8IWZ3 2542 aaKnown RBP2.36□□□□□ -2.03
CCDC58-203ENST00000466854 HELZP42694 1942 aaKnown RBP2.36□□□□□ -2.03
CCDC58-203ENST00000466854 HIVEP1P15822 2718 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 PIKFYVEQ9Y2I7 2098 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 NBASA2RRP1 2371 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 FN1P02751 2386 aaKnown RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGKV1-6A0A0C4DH72 117 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGKV1-12A0A0C4DH73 117 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 FNDC10F2Z333 226 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGKV1-39P01597 117 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGKV1D-12P01611 117 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGLV2-23P01705 113 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGHV3-23P01764 117 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 IGKV1D-39P04432 117 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 LINC00869P0C866 280 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 GZMBP10144 247 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 NMUP48645 174 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 HERVK_113P61574 105 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 ADIGQ0VDE8 80 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 MEIG1Q5JSS6 88 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 SLC25A34Q6PIV7 304 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 CEMP1Q6PRD7 247 aaPredicted RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 LCN15Q6UWW0 184 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 TRAPPC6BQ86SZ2 158 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 RPS19BP1Q86WX3 136 aaKnown RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF645Q8N7E2 425 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 OR5D14Q8NGL3 314 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 PPTC7Q8NI37 304 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 C7orf33Q8WU49 177 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 TWIST2Q8WVJ9 160 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 C2orf50Q96LR7 162 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 YPEL4Q96NS1 127 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 MRPL32Q9BYC8 188 aaKnown RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 TMEM191AQ9H0A3 160 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 PARP12Q9H0J9 701 aaKnown RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 FAM49BQ9NUQ9 324 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 MARCOQ9UEW3 520 aaPredicted RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 Q9Y3F1 56 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 SOX21Q9Y651 276 aaPredicted RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 DSPPQ9NZW4 1301 aa2.35□□□□□ -2.03
CCDC58-203ENST00000466854 FBN1P35555 2871 aaKnown RBP2.35□□□□□ -2.03
CCDC58-203ENST00000466854 CHD3Q12873 2000 aaKnown RBP2.34□□□□□ -2.03
CCDC58-203ENST00000466854 ATRQ13535 2644 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 TRBV20OR9-2A0A075B6H5 130 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 A0A0G2JMM0 328 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 A0A1W2PPB8 328 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 TMEM72A0PK05 275 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 ZNF860A6NHJ4 632 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 KIR3DP1A8MWS1 328 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 BUB1B-PAK6H3BSN5 160 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 PLA2G10O15496 165 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 SOCS1O15524 211 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 PLXNB1O43157 2135 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 KRASP01116 189 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 TNFP01375 233 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 C1QAP02745 245 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 HIST1H1DP16402 221 aaKnown RBP2.34□□□□□ -2.03
CCDC58-203ENST00000466854 RPL22P35268 128 aaKnown RBP2.34□□□□□ -2.03
CCDC58-203ENST00000466854 S100A10P60903 97 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 FGF12P61328 243 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 QRFPP83859 136 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 HOXC5Q00444 222 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 RRN3P1Q2M238 152 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 ORMDL2Q53FV1 153 aa2.34□□□□□ -2.03
CCDC58-203ENST00000466854 Q5BKY6 102 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms