RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 GDF5OSQ5U4N7 250 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 HIST2H2BCQ6DN03 193 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 Q71RC1 249 aaPredicted RBP13.11□□□□□ -0.31
NUP58-208ENST00000466694 NOL4LQ96MY1 436 aaPredicted RBP13.11□□□□□ -0.31
NUP58-208ENST00000466694 LINC00527Q9UJ94 153 aa13.11□□□□□ -0.31
NUP58-208ENST00000466694 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
NUP58-208ENST00000466694 H3BUA1 57 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 TRGV3P03979 118 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 PAFAH1B2P68402 229 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 SLAQ13239 276 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
NUP58-208ENST00000466694 TPPP2P59282 170 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 HBBP68871 147 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 Q5PR19 223 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 KRTAP1-3Q8IUG1 177 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 OR2D3Q8NGH3 330 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 PRDM13Q9H4Q3 707 aa13.1□□□□□ -0.31
NUP58-208ENST00000466694 J3QLI3 93 aa13.09□□□□□ -0.31
NUP58-208ENST00000466694 SRIP30626 198 aa13.09□□□□□ -0.31
NUP58-208ENST00000466694 METTL26Q96S19 204 aa13.09□□□□□ -0.31
NUP58-208ENST00000466694 F2Z2F3 143 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 CHEK1O14757 476 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 PPIFP30405 207 aaKnown RBP13.08□□□□□ -0.32
NUP58-208ENST00000466694 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 ZANQ9Y493 2812 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 IGHG4P01861 327 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 CAMPP49913 170 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 FOXA3P55318 350 aaPredicted RBP13.08□□□□□ -0.32
NUP58-208ENST00000466694 PRSS57Q6UWY2 283 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 U3KQE9 123 aa13.08□□□□□ -0.32
NUP58-208ENST00000466694 GCN1Q92616 2671 aaKnown RBP13.07□□□□□ -0.32
NUP58-208ENST00000466694 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
NUP58-208ENST00000466694 LINC00587B1AMM8 73 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
NUP58-208ENST00000466694 CT45A10P0DMU9 189 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 PRB4P10163 310 aaPredicted RBP13.07□□□□□ -0.32
NUP58-208ENST00000466694 CRIP1P50238 77 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 C8orf49Q96NF6 230 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 ASCL2Q99929 193 aa13.07□□□□□ -0.32
NUP58-208ENST00000466694 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.06□□□□□ -0.32
NUP58-208ENST00000466694 MAPK1IP1LQ8NDC0 245 aa13.06□□□□□ -0.32
NUP58-208ENST00000466694 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
NUP58-208ENST00000466694 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
NUP58-208ENST00000466694 A8MWP6 167 aa13.06□□□□□ -0.32
NUP58-208ENST00000466694 ARL3P36405 182 aa13.06□□□□□ -0.32
NUP58-208ENST00000466694 BLCAPP62952 87 aa13.06□□□□□ -0.32
NUP58-208ENST00000466694 PRRC2AP48634 2157 aaKnown RBP13.05□□□□□ -0.32
NUP58-208ENST00000466694 HAX1O00165 279 aa13.05□□□□□ -0.32
NUP58-208ENST00000466694 APOHP02749 345 aaPredicted RBP13.05□□□□□ -0.32
NUP58-208ENST00000466694 HLA-DMBP28068 263 aa13.05□□□□□ -0.32
NUP58-208ENST00000466694 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
NUP58-208ENST00000466694 IGFL4Q6B9Z1 124 aa13.05□□□□□ -0.32
NUP58-208ENST00000466694 LCN12Q6JVE5 192 aa13.05□□□□□ -0.32
NUP58-208ENST00000466694 KCNS1Q96KK3 526 aa13.05□□□□□ -0.32
NUP58-208ENST00000466694 PRR25Q96S07 402 aa13.05□□□□□ -0.32
NUP58-208ENST00000466694 SSBP4Q9BWG4 385 aaPredicted RBP13.05□□□□□ -0.32
NUP58-208ENST00000466694 IQCJQ1A5X6 159 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 C18orf32Q8TCD1 76 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 SAMD10Q9BYL1 202 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 ZNF580Q9UK33 172 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 PDZD2O15018 2839 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.04□□□□□ -0.32
NUP58-208ENST00000466694 IGHV3-66A0A0C4DH42 116 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 IGHV4-31P0DP07 118 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 Q6AWC8 147 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 Q96MF0 132 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 RCHY1Q96PM5 261 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 VGLL1Q99990 258 aa13.04□□□□□ -0.32
NUP58-208ENST00000466694 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
NUP58-208ENST00000466694 CSPG4Q6UVK1 2322 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
NUP58-208ENST00000466694 ZNF207O43670 478 aaKnown RBP13.03□□□□□ -0.32
NUP58-208ENST00000466694 TGFAP01135 160 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 IGLV1-40P01703 118 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 PKIAP61925 76 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 DEFB112Q30KQ8 113 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 Q6ZS46 218 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
NUP58-208ENST00000466694 RBAKDNA6NC62 111 aa13.02□□□□□ -0.32
NUP58-208ENST00000466694 NDUFA4O00483 81 aa13.02□□□□□ -0.32
NUP58-208ENST00000466694 SH2D1AO60880 128 aa13.02□□□□□ -0.32
NUP58-208ENST00000466694 GPX1P07203 203 aa13.02□□□□□ -0.32
NUP58-208ENST00000466694 Q6ZWC4 215 aa13.02□□□□□ -0.32
NUP58-208ENST00000466694 SIGLECL1Q8N7X8 197 aa13.02□□□□□ -0.32
NUP58-208ENST00000466694 IGHV3OR16-13A0A075B7E8 117 aa13.02□□□□□ -0.33
NUP58-208ENST00000466694 IGHV3-74A0A0B4J1X5 117 aa13.02□□□□□ -0.33
NUP58-208ENST00000466694 A0A1B0GUT8 65 aa13.02□□□□□ -0.33
NUP58-208ENST00000466694 A0A1W2PS18 150 aa13.02□□□□□ -0.33
NUP58-208ENST00000466694 PF4V1P10720 104 aa13.02□□□□□ -0.33
NUP58-208ENST00000466694 CFHR3Q02985 330 aa13.02□□□□□ -0.33
NUP58-208ENST00000466694 MRPL53Q96EL3 112 aaKnown RBP13.02□□□□□ -0.33
NUP58-208ENST00000466694 IGHV3-49A0A0A0MS15 119 aa13.01□□□□□ -0.33
NUP58-208ENST00000466694 A0A1B0GW15 77 aa13.01□□□□□ -0.33
NUP58-208ENST00000466694 SCGB1D1O95968 90 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms