RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 TRAV25A0A0B4J276 109 aa12.87□□□□□ -0.35
PTPRU-206ENST00000465525 LCN12Q6JVE5 192 aa12.87□□□□□ -0.35
PTPRU-206ENST00000465525 SCO2A0A1W2PP80 73 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 ISLRO14498 428 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 CEBPGP53567 150 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 OXLD1Q5BKU9 147 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 PSMG4Q5JS54 123 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 LYPD1Q8N2G4 141 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF738Q8NE65 137 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-206ENST00000465525 TREM1Q9NP99 234 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF256Q9Y2P7 627 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-206ENST00000465525 ARL2-SNX15V9GYD0 113 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 PRAC2D3DTV9 90 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 ID1P41134 155 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 PSG3Q16557 428 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
PTPRU-206ENST00000465525 CMYA5Q8N3K9 4069 aa12.85□□□□□ -0.35
PTPRU-206ENST00000465525 OR4C46A6NHA9 309 aa12.85□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF705DP0CH99 300 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF705BP0CI00 300 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-206ENST00000465525 PEA15Q15121 130 aa12.85□□□□□ -0.35
PTPRU-206ENST00000465525 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
PTPRU-206ENST00000465525 IGKV2-40A0A087WW87 121 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-206ENST00000465525 F6UB75 175 aa12.84□□□□□ -0.35
PTPRU-206ENST00000465525 IGKV2D-40P01614 121 aaPredicted RBP12.84□□□□□ -0.35
PTPRU-206ENST00000465525 SGK494Q96LW2 274 aa12.84□□□□□ -0.35
PTPRU-206ENST00000465525 EPDR1Q9UM22 224 aa12.84□□□□□ -0.35
PTPRU-206ENST00000465525 TMEM218A2RU14 115 aa12.83□□□□□ -0.35
PTPRU-206ENST00000465525 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.35
PTPRU-206ENST00000465525 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.35
PTPRU-206ENST00000465525 DEFB131AP59861 70 aa12.83□□□□□ -0.35
PTPRU-206ENST00000465525 SNRPD3P62318 126 aaKnown RBP12.83□□□□□ -0.35
PTPRU-206ENST00000465525 ZNF124Q15973 351 aa12.83□□□□□ -0.35
PTPRU-206ENST00000465525 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.35
PTPRU-206ENST00000465525 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.35
PTPRU-206ENST00000465525 LINC00479Q96M42 142 aa12.83□□□□□ -0.35
PTPRU-206ENST00000465525 NKX6-2Q9C056 277 aaPredicted RBP12.83□□□□□ -0.35
PTPRU-206ENST00000465525 ZMAT5Q9UDW3 170 aaKnown RBP12.83□□□□□ -0.35
PTPRU-206ENST00000465525 TRAV2A0A0B4J234 112 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 PEX7O00628 323 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 CSN1S1P47710 185 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 SAMD5Q5TGI4 173 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 ASCL2Q99929 193 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 DERL1Q9BUN8 251 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 MAP6D1Q9H9H5 199 aa12.83□□□□□ -0.36
PTPRU-206ENST00000465525 AGRNO00468 2067 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 DIRC3C9JPN6 131 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 G3V4G9 280 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 TCRAP04437 139 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 CD7P09564 240 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 ERCC8Q13216 396 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 SAMD13Q5VXD3 122 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 APRG1Q8IVJ8 170 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 PRELID1Q9Y255 219 aa12.82□□□□□ -0.36
PTPRU-206ENST00000465525 TRAV8-1A0A0A6YYK1 113 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 F6UZH7 168 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 PDE6DO43924 150 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 APOC3P02656 99 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 BEAN1Q3B7T3 259 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 GDF5OSQ5U4N7 250 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 TXNDC17Q9BRA2 123 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 ATG101Q9BSB4 218 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 WFDC10AQ9H1F0 79 aa12.81□□□□□ -0.36
PTPRU-206ENST00000465525 KNCNA6PVL3 124 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 EGFEM1PQ0D2K5 195 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 ZNF674Q2M3X9 581 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 VGLL1Q99990 258 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 MGAM2Q2M2H8 2515 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 AKR1C3P42330 323 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 HIST1H1AQ02539 215 aaPredicted RBP12.8□□□□□ -0.36
PTPRU-206ENST00000465525 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
PTPRU-206ENST00000465525 MRPL53Q96EL3 112 aaKnown RBP12.8□□□□□ -0.36
PTPRU-206ENST00000465525 C2CD4CQ8TF44 421 aa12.79□□□□□ -0.36
PTPRU-206ENST00000465525 HIST1H2BAQ96A08 127 aa12.79□□□□□ -0.36
PTPRU-206ENST00000465525 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
PTPRU-206ENST00000465525 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
PTPRU-206ENST00000465525 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 IGKV3-20P01619 116 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 KRTAP10-11P60412 298 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 C10orf91Q5T1B1 145 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 SVBPQ8N300 66 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 Q8TAT8 98 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 PRR25Q96S07 402 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 SEC11CQ9BY50 192 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 PARLQ9H300 379 aa12.78□□□□□ -0.36
PTPRU-206ENST00000465525 CARHSP1Q9Y2V2 147 aaKnown RBP12.78□□□□□ -0.36
PTPRU-206ENST00000465525 F8W036 122 aa12.77□□□□□ -0.36
PTPRU-206ENST00000465525 TMEM250H0YL14 139 aa12.77□□□□□ -0.36
PTPRU-206ENST00000465525 SCO1O75880 301 aa12.77□□□□□ -0.36
PTPRU-206ENST00000465525 RPL35P42766 123 aaKnown RBP12.77□□□□□ -0.36
PTPRU-206ENST00000465525 CNN1P51911 297 aaKnown RBP12.77□□□□□ -0.36
PTPRU-206ENST00000465525 ACTL10Q5JWF8 245 aa12.77□□□□□ -0.36
PTPRU-206ENST00000465525 OR8A1Q8NGG7 326 aa12.77□□□□□ -0.36
PTPRU-206ENST00000465525 IGLV2-11P01706 119 aa12.77□□□□□ -0.37
PTPRU-206ENST00000465525 OR10J6PQ8NGY7 276 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms