RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 C2CD4CQ8TF44 421 aa16.36■□□□□ 0.21
ITGA4-204ENST00000465522 SORL1Q92673 2214 aa16.36■□□□□ 0.21
ITGA4-204ENST00000465522 PAFAH1B2P68402 229 aa16.36■□□□□ 0.21
ITGA4-204ENST00000465522 DEFB114Q30KQ6 69 aa16.36■□□□□ 0.21
ITGA4-204ENST00000465522 PRELID1Q9Y255 219 aa16.36■□□□□ 0.21
ITGA4-204ENST00000465522 CARHSP1Q9Y2V2 147 aaKnown RBP16.36■□□□□ 0.21
ITGA4-204ENST00000465522 ISLRO14498 428 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 SOCS3O14543 225 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 AKR1C3P42330 323 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 RPL35P42766 123 aaKnown RBP16.35■□□□□ 0.21
ITGA4-204ENST00000465522 TFPI2P48307 235 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 CNN1P51911 297 aaKnown RBP16.35■□□□□ 0.21
ITGA4-204ENST00000465522 SAMD13Q5VXD3 122 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 LCN12Q6JVE5 192 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 LINC00482Q8N8I6 264 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 DCANP1Q8TF63 244 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 LINC00479Q96M42 142 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 NIPSNAP3BQ9BS92 247 aa16.35■□□□□ 0.21
ITGA4-204ENST00000465522 ZNF705FA8MVS1 300 aaPredicted RBP16.34■□□□□ 0.21
ITGA4-204ENST00000465522 DIRC3C9JPN6 131 aa16.34■□□□□ 0.21
ITGA4-204ENST00000465522 SAP30O75446 220 aa16.34■□□□□ 0.21
ITGA4-204ENST00000465522 GOLT1AQ6ZVE7 132 aa16.34■□□□□ 0.21
ITGA4-204ENST00000465522 ARL6IP6Q8N6S5 226 aa16.34■□□□□ 0.21
ITGA4-204ENST00000465522 ID1P41134 155 aa16.33■□□□□ 0.21
ITGA4-204ENST00000465522 PSG3Q16557 428 aa16.33■□□□□ 0.21
ITGA4-204ENST00000465522 VWFP04275 2813 aa16.33■□□□□ 0.21
ITGA4-204ENST00000465522 K7EQM0 130 aa16.33■□□□□ 0.2
ITGA4-204ENST00000465522 PRB4P10163 310 aaPredicted RBP16.33■□□□□ 0.2
ITGA4-204ENST00000465522 CD300EQ496F6 205 aaPredicted RBP16.33■□□□□ 0.2
ITGA4-204ENST00000465522 TMEM61Q8N0U2 210 aa16.33■□□□□ 0.2
ITGA4-204ENST00000465522 TRAV34A0A0B4J273 112 aa16.32■□□□□ 0.2
ITGA4-204ENST00000465522 TSPAN4O14817 238 aa16.32■□□□□ 0.2
ITGA4-204ENST00000465522 UBE2G1P62253 170 aa16.32■□□□□ 0.2
ITGA4-204ENST00000465522 TMEM241Q24JQ0 296 aa16.32■□□□□ 0.2
ITGA4-204ENST00000465522 K7EQG2 157 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 GUCA2BQ16661 112 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 SHISA2Q6UWI4 295 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 MRPL53Q96EL3 112 aaKnown RBP16.31■□□□□ 0.2
ITGA4-204ENST00000465522 SGK494Q96LW2 274 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 NAT8Q9UHE5 227 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 KLF12Q9Y4X4 402 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 SERTM2A0A1B0GWG4 89 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 TAS2R60P59551 318 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 SVBPQ8N300 66 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 C20orf173Q96LM9 149 aa16.31■□□□□ 0.2
ITGA4-204ENST00000465522 NOTCH3Q9UM47 2321 aa16.3■□□□□ 0.2
ITGA4-204ENST00000465522 TRAV25A0A0B4J276 109 aa16.3■□□□□ 0.2
ITGA4-204ENST00000465522 S100A9P06702 114 aaKnown RBP16.3■□□□□ 0.2
ITGA4-204ENST00000465522 SNRPD3P62318 126 aaKnown RBP16.3■□□□□ 0.2
ITGA4-204ENST00000465522 TMEM183BQ1AE95 376 aa16.3■□□□□ 0.2
ITGA4-204ENST00000465522 ZNF738Q8NE65 137 aa16.3■□□□□ 0.2
ITGA4-204ENST00000465522 TVP23CQ96ET8 276 aa16.3■□□□□ 0.2
ITGA4-204ENST00000465522 FMC1Q96HJ9 113 aa16.3■□□□□ 0.2
ITGA4-204ENST00000465522 TRBV20OR9-2A0A075B6H5 130 aa16.29■□□□□ 0.2
ITGA4-204ENST00000465522 GNG4P50150 75 aa16.29■□□□□ 0.2
ITGA4-204ENST00000465522 SDF2L1Q9HCN8 221 aa16.29■□□□□ 0.2
ITGA4-204ENST00000465522 IGKV2-40A0A087WW87 121 aaPredicted RBP16.28■□□□□ 0.2
ITGA4-204ENST00000465522 TRAV8-1A0A0A6YYK1 113 aa16.28■□□□□ 0.2
ITGA4-204ENST00000465522 PRAC2D3DTV9 90 aa16.28■□□□□ 0.2
ITGA4-204ENST00000465522 IGKV2D-40P01614 121 aaPredicted RBP16.28■□□□□ 0.2
ITGA4-204ENST00000465522 CENPWQ5EE01 88 aa16.28■□□□□ 0.2
ITGA4-204ENST00000465522 TMEM75Q8N9X5 138 aa16.28■□□□□ 0.2
ITGA4-204ENST00000465522 C9JCJ5 164 aa16.28■□□□□ 0.2
ITGA4-204ENST00000465522 ZNF688P0C7X2 276 aa16.28■□□□□ 0.2
ITGA4-204ENST00000465522 TRAV2A0A0B4J234 112 aa16.27■□□□□ 0.19
ITGA4-204ENST00000465522 IZUMO1RA6ND01 250 aa16.27■□□□□ 0.19
ITGA4-204ENST00000465522 PGPEP1LA6NFU8 196 aa16.27■□□□□ 0.19
ITGA4-204ENST00000465522 M0R036 132 aa16.27■□□□□ 0.19
ITGA4-204ENST00000465522 BAGE2Q86Y30 109 aa16.27■□□□□ 0.19
ITGA4-204ENST00000465522 FAM24BQ8N5W8 94 aa16.27■□□□□ 0.19
ITGA4-204ENST00000465522 SPAG8Q99932 426 aaPredicted RBP16.27■□□□□ 0.19
ITGA4-204ENST00000465522 RBAKDNA6NC62 111 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 SNAPINO95295 136 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 IGLV1-51P01701 117 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 IGLV2-11P01706 119 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 FLI1Q01543 452 aaPredicted RBP16.26■□□□□ 0.19
ITGA4-204ENST00000465522 PNRC1Q12796 327 aaPredicted RBP16.26■□□□□ 0.19
ITGA4-204ENST00000465522 OCC1Q8TAD7 63 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 IGF2BP2-AS1Q96M15 143 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 TRRAPQ9Y4A5 3859 aa16.26■□□□□ 0.19
ITGA4-204ENST00000465522 OR4C46A6NHA9 309 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 RPL23P62829 140 aaKnown RBP16.25■□□□□ 0.19
ITGA4-204ENST00000465522 ADIRFQ15847 76 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 PSMG4Q5JS54 123 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 PRNTQ86SH4 94 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 VGLL1Q99990 258 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 AURKAIP1Q9NWT8 199 aaPredicted RBP16.25■□□□□ 0.19
ITGA4-204ENST00000465522 PSG8Q9UQ74 426 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 CD33P20138 364 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 CLRN3Q8NCR9 226 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 OR2K2Q8NGT1 345 aa16.25■□□□□ 0.19
ITGA4-204ENST00000465522 FBLL1A6NHQ2 334 aaKnown RBP16.24■□□□□ 0.19
ITGA4-204ENST00000465522 ERCC8Q13216 396 aa16.24■□□□□ 0.19
ITGA4-204ENST00000465522 LINC01551Q86U37 167 aa16.24■□□□□ 0.19
ITGA4-204ENST00000465522 LY96Q9Y6Y9 160 aa16.24■□□□□ 0.19
ITGA4-204ENST00000465522 TRBV6-1A0A0K0K1D8 114 aa16.23■□□□□ 0.19
ITGA4-204ENST00000465522 LTAP01374 205 aa16.23■□□□□ 0.19
ITGA4-204ENST00000465522 INSL3P51460 131 aa16.23■□□□□ 0.19
ITGA4-204ENST00000465522 Q86TA4 180 aa16.23■□□□□ 0.19
ITGA4-204ENST00000465522 OR10J6PQ8NGY7 276 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms