RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 OR10P1Q8NGE3 313 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 OR10J6PQ8NGY7 276 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 TMEM263Q8WUH6 116 aaKnown RBP6.73□□□□□ -1.33
USP39-212ENST00000465514 GNPNAT1Q96EK6 184 aaPredicted RBP6.73□□□□□ -1.33
USP39-212ENST00000465514 PARD6GQ9BYG4 376 aaPredicted RBP6.73□□□□□ -1.33
USP39-212ENST00000465514 Q9H8V8 135 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 ZNF331Q9NQX6 463 aaPredicted RBP6.73□□□□□ -1.33
USP39-212ENST00000465514 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 FLVCR2Q9UPI3 526 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 RNF24Q9Y225 148 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
USP39-212ENST00000465514 TRAV26-1A0A087WT03 109 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 A0A0J9YY99 117 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 PRAC2D3DTV9 90 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 H3BTX0 84 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 ZNF701M0R085 212 aaPredicted RBP6.72□□□□□ -1.33
USP39-212ENST00000465514 AGPAT2O15120 278 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 NDUFB6O95139 128 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 SCGB1D2O95969 90 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 OR4E1P0C645 316 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 CXCL2P19875 107 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 M6PRP20645 277 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 ARL16Q0P5N6 197 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 CCDC28AQ8IWP9 274 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 LINC00612Q8N6U2 182 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 RXFP4Q8TDU9 374 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 SLC50A1Q9BRV3 221 aa6.72□□□□□ -1.33
USP39-212ENST00000465514 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 NAP1L6A6NFF2 107 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 SLC17A3O00476 420 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 COX7A2P2O60397 106 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 TSC22D2O75157 780 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 GAGE7O76087 117 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 HOXA5P20719 270 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 INPP1P49441 399 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 TAS2R30P59541 319 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 ESRGQ1W209 222 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 IAH1Q2TAA2 248 aaPredicted RBP6.71□□□□□ -1.34
USP39-212ENST00000465514 C4orf46Q504U0 113 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 TTC32Q5I0X7 151 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 GFI1BQ5VTD9 330 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 MORN5Q5VZ52 161 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 ZNF546Q86UE3 836 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 BPIFA4PQ86YQ2 179 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 ZBTB8BQ8NAP8 495 aaPredicted RBP6.71□□□□□ -1.34
USP39-212ENST00000465514 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 SRRQ9GZT4 340 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 GSKIPQ9P0R6 139 aa6.71□□□□□ -1.34
USP39-212ENST00000465514 RCL1Q9Y2P8 373 aaKnown RBP6.71□□□□□ -1.34
USP39-212ENST00000465514 LINC00854A0A1B0GVQ3 168 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 C7orf66A4D0T2 115 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 CCDC160A6NGH7 325 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 SNURFLB1AK76 121 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 H3BQ15 152 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 J3KRW8 73 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 RLN2P04090 185 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 CT45A10P0DMU9 189 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 OPCMLQ14982 345 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 BAK1Q16611 211 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 SPANXN2Q5MJ10 180 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 C10orf113Q5VZT2 155 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 MGST2Q99735 147 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 GGACTQ9BVM4 153 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 Q9H3A6 140 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 PXMP4Q9Y6I8 212 aa6.7□□□□□ -1.34
USP39-212ENST00000465514 TRAV5A0A0B4J249 113 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 H3BNG1 76 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 MBPP02686 304 aaPredicted RBP6.69□□□□□ -1.34
USP39-212ENST00000465514 IGLC2P0DOY2 106 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 TRIQKQ629K1 86 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 SAT2Q96F10 170 aaPredicted RBP6.69□□□□□ -1.34
USP39-212ENST00000465514 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 TMPRSS5Q9H3S3 457 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 DNAJC4Q9NNZ3 241 aa6.69□□□□□ -1.34
USP39-212ENST00000465514 MRPS16Q9Y3D3 137 aaKnown RBP6.69□□□□□ -1.34
USP39-212ENST00000465514 A0A1W2PPQ1 181 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 NPIPB6E9PJ23 425 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 IFNA5P01569 189 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 BTCP35070 178 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 LEPP41159 167 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 CAMLGP49069 296 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 DAZ2Q13117 558 aaKnown RBP6.68□□□□□ -1.34
USP39-212ENST00000465514 Q6ZTI0 123 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 Q8N3U1 123 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 ZNF431Q8TF32 576 aaPredicted RBP6.68□□□□□ -1.34
USP39-212ENST00000465514 MITD1Q8WV92 249 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 ODF3Q96PU9 254 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 ZNF586Q9NXT0 402 aa6.68□□□□□ -1.34
USP39-212ENST00000465514 CENPXA8MT69 81 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 L7N2F9 121 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 BCAP31P51572 246 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 VAMP2P63027 116 aa6.67□□□□□ -1.34
USP39-212ENST00000465514 RAB31Q13636 194 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms