RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 XCL2Q9UBD3 114 aa14.77□□□□□ -0.05
SKA3-205ENST00000465471 hCG_2014768A0A024R1R8 64 aa14.76□□□□□ -0.05
SKA3-205ENST00000465471 A0A1W2PPV4 95 aa14.76□□□□□ -0.05
SKA3-205ENST00000465471 EIF3GO75821 320 aaKnown RBP eCLIP14.76□□□□□ -0.05
SKA3-205ENST00000465471 CDC34P49427 236 aaPredicted RBP14.76□□□□□ -0.05
SKA3-205ENST00000465471 UBE2L3P68036 154 aaKnown RBP14.76□□□□□ -0.05
SKA3-205ENST00000465471 HIST1H1AQ02539 215 aaPredicted RBP14.76□□□□□ -0.05
SKA3-205ENST00000465471 PQLC2Q6ZP29 291 aa14.76□□□□□ -0.05
SKA3-205ENST00000465471 PHYHIPLQ96FC7 376 aa14.76□□□□□ -0.05
SKA3-205ENST00000465471 PRELID1Q9Y255 219 aa14.76□□□□□ -0.05
SKA3-205ENST00000465471 M0R3E3 92 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 BCL2L11O43521 198 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 STAG3L2P0CL84 134 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 STAG3L3P0CL85 134 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 PRB4P10163 310 aaPredicted RBP14.75□□□□□ -0.05
SKA3-205ENST00000465471 FXYD7P58549 80 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 EXOC3-AS1Q8N2X6 119 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 RAB24Q969Q5 203 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 X6R8D5 127 aa14.75□□□□□ -0.05
SKA3-205ENST00000465471 CSMD3Q7Z407 3707 aa14.74□□□□□ -0.05
SKA3-205ENST00000465471 C1QBP02746 253 aa14.74□□□□□ -0.05
SKA3-205ENST00000465471 ZNF705AQ6ZN79 300 aaPredicted RBP14.74□□□□□ -0.05
SKA3-205ENST00000465471 AKAP14Q86UN6 197 aa14.74□□□□□ -0.05
SKA3-205ENST00000465471 LYPD1Q8N2G4 141 aa14.74□□□□□ -0.05
SKA3-205ENST00000465471 C11orf68Q9H3H3 251 aaKnown RBP14.74□□□□□ -0.05
SKA3-205ENST00000465471 A0A0J9YWU9 116 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 NPIPB6E9PJ23 425 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 BOLA2-SMG1P6H3BVE0 249 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 CRXO43186 299 aaPredicted RBP14.73□□□□□ -0.05
SKA3-205ENST00000465471 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 Q8NAQ8 132 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 MUC7Q8TAX7 377 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 AAMDCQ9H7C9 122 aa14.73□□□□□ -0.05
SKA3-205ENST00000465471 A0A1B0GVG6 124 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 AMBPP02760 352 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 ARL14EPLP0DKL9 152 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 ICAM4Q14773 271 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 TMUB2Q71RG4 321 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 OR10J6PQ8NGY7 276 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 SUN5Q8TC36 379 aa14.72□□□□□ -0.05
SKA3-205ENST00000465471 KANTRA0A1W2PQU2 76 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 M0R2Z0 102 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 HMGB3O15347 200 aaKnown RBP14.71□□□□□ -0.05
SKA3-205ENST00000465471 MIFP14174 115 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 ZNF726P1Q15940 193 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 SPINK13Q1W4C9 94 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 IGF2BP2-AS1Q96M15 143 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 NEU1Q99519 415 aa14.71□□□□□ -0.05
SKA3-205ENST00000465471 ACTR3CQ9C0K3 210 aaPredicted RBP14.71□□□□□ -0.05
SKA3-205ENST00000465471 STARD9Q9P2P6 4700 aa14.71□□□□□ -0.06
SKA3-205ENST00000465471 LGALSLQ3ZCW2 172 aaPredicted RBP14.7□□□□□ -0.06
SKA3-205ENST00000465471 C1orf158Q8N1D5 194 aa14.7□□□□□ -0.06
SKA3-205ENST00000465471 ODF3Q96PU9 254 aa14.7□□□□□ -0.06
SKA3-205ENST00000465471 ZNF471Q9BX82 626 aaPredicted RBP14.7□□□□□ -0.06
SKA3-205ENST00000465471 Q9H3A6 140 aa14.7□□□□□ -0.06
SKA3-205ENST00000465471 CTXND1A0A1B0GTU2 59 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 C3orf84H3BNL1 204 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 SEC11BP0C7V7 166 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 RANP62826 216 aaKnown RBP14.69□□□□□ -0.06
SKA3-205ENST00000465471 CD300CQ08708 224 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 AKR1C8PQ5T2L2 129 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 STOML3Q8TAV4 291 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 HYLS1Q96M11 299 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 PLA2G2EQ9NZK7 142 aa14.69□□□□□ -0.06
SKA3-205ENST00000465471 IGHV4-28A0A0C4DH34 117 aa14.68□□□□□ -0.06
SKA3-205ENST00000465471 CT45A10P0DMU9 189 aa14.68□□□□□ -0.06
SKA3-205ENST00000465471 GCHFRP30047 84 aa14.68□□□□□ -0.06
SKA3-205ENST00000465471 BAP18Q8IXM2 172 aa14.68□□□□□ -0.06
SKA3-205ENST00000465471 OTORQ9NRC9 128 aa14.68□□□□□ -0.06
SKA3-205ENST00000465471 PFDN1O60925 122 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 CXorf1O96002 111 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 INSP01308 110 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 RBMY1A1P0DJD3 496 aaKnown RBP14.67□□□□□ -0.06
SKA3-205ENST00000465471 RBMY1CP0DJD4 496 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 CDKN1BP46527 198 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 RBMY1FQ15415 496 aaKnown RBP14.67□□□□□ -0.06
SKA3-205ENST00000465471 C9orf47Q6ZRZ4 202 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 IL17DQ8TAD2 202 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 FAM19A4Q96LR4 140 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 GOLT1BQ9Y3E0 138 aa14.67□□□□□ -0.06
SKA3-205ENST00000465471 TRAV12-2A0A075B6T6 113 aa14.66□□□□□ -0.06
SKA3-205ENST00000465471 SMIM9A6NGZ8 99 aa14.66□□□□□ -0.06
SKA3-205ENST00000465471 EIF5AP63241 154 aaKnown RBP14.66□□□□□ -0.06
SKA3-205ENST00000465471 AGPAT4-IT1Q9H0P7 198 aa14.66□□□□□ -0.06
SKA3-205ENST00000465471 PPP1R14DQ9NXH3 145 aa14.66□□□□□ -0.06
SKA3-205ENST00000465471 IGKV2-40A0A087WW87 121 aaPredicted RBP14.65□□□□□ -0.06
SKA3-205ENST00000465471 IGKV2D-40P01614 121 aaPredicted RBP14.65□□□□□ -0.06
SKA3-205ENST00000465471 ERCC8Q13216 396 aa14.65□□□□□ -0.06
SKA3-205ENST00000465471 ARL6IP6Q8N6S5 226 aa14.65□□□□□ -0.06
SKA3-205ENST00000465471 LINC00477Q96M19 166 aa14.65□□□□□ -0.06
SKA3-205ENST00000465471 TMEM167BQ9NRX6 74 aa14.65□□□□□ -0.06
SKA3-205ENST00000465471 RBAKDNA6NC62 111 aa14.64□□□□□ -0.07
SKA3-205ENST00000465471 DEFB4AO15263 64 aa14.64□□□□□ -0.07
SKA3-205ENST00000465471 SLC25A5P05141 298 aaKnown RBP14.64□□□□□ -0.07
SKA3-205ENST00000465471 TPT1P13693 172 aaKnown RBP14.64□□□□□ -0.07
SKA3-205ENST00000465471 TSPOP30536 169 aa14.64□□□□□ -0.07
SKA3-205ENST00000465471 KIR3DS1Q14943 382 aa14.64□□□□□ -0.07
SKA3-205ENST00000465471 CASC10Q5T4H9 136 aa14.64□□□□□ -0.07
SKA3-205ENST00000465471 RXFP4Q8TDU9 374 aa14.64□□□□□ -0.07
SKA3-205ENST00000465471 VGLL1Q99990 258 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms