RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PSG3Q16557 428 aa12.93□□□□□ -0.34
CPSF4-209ENST00000465132 ODF3L2Q3SX64 289 aa12.93□□□□□ -0.34
CPSF4-209ENST00000465132 SAT2Q96F10 170 aaPredicted RBP12.93□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF705EA8MWA4 302 aaPredicted RBP12.92□□□□□ -0.34
CPSF4-209ENST00000465132 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
CPSF4-209ENST00000465132 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
CPSF4-209ENST00000465132 ALKAL2Q6UX46 152 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 ARL6IP6Q8N6S5 226 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 UBQLN2Q9UHD9 624 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 ARL2-SNX15V9GYD0 113 aa12.92□□□□□ -0.34
CPSF4-209ENST00000465132 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
CPSF4-209ENST00000465132 TRAV1-1A0A0B4J248 108 aa12.91□□□□□ -0.34
CPSF4-209ENST00000465132 NUTF2P61970 127 aaKnown RBP12.91□□□□□ -0.34
CPSF4-209ENST00000465132 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
CPSF4-209ENST00000465132 STHQ8IWL8 128 aa12.91□□□□□ -0.34
CPSF4-209ENST00000465132 SUN5Q8TC36 379 aa12.91□□□□□ -0.34
CPSF4-209ENST00000465132 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
CPSF4-209ENST00000465132 A0A1W2PRE2 83 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 IFNA1P01562 189 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 RANP62826 216 aaKnown RBP12.9□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-209ENST00000465132 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 SRD5A3Q9H8P0 318 aa12.9□□□□□ -0.34
CPSF4-209ENST00000465132 K7EQM0 130 aa12.89□□□□□ -0.35
CPSF4-209ENST00000465132 TAGLN2P37802 199 aaKnown RBP12.89□□□□□ -0.35
CPSF4-209ENST00000465132 FHITP49789 147 aa12.89□□□□□ -0.35
CPSF4-209ENST00000465132 APOC4P55056 127 aa12.89□□□□□ -0.35
CPSF4-209ENST00000465132 RPUSD4Q96CM3 377 aaKnown RBP12.89□□□□□ -0.35
CPSF4-209ENST00000465132 C17orf77Q96MU5 243 aa12.89□□□□□ -0.35
CPSF4-209ENST00000465132 Q9H3A6 140 aa12.89□□□□□ -0.35
CPSF4-209ENST00000465132 RETNQ9HD89 108 aa12.89□□□□□ -0.35
CPSF4-209ENST00000465132 LOC102724200A0A096LPH7 203 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-209ENST00000465132 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 SERTM2A0A1B0GWG4 89 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 H3BTX0 84 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 NDUFB4O95168 129 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 ICAM4Q14773 271 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 APRG1Q8IVJ8 170 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 FAM24BQ8N5W8 94 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 DEFB125Q8N687 156 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 TXNDC17Q9BRA2 123 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 SAV1Q9H4B6 383 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-209ENST00000465132 MANBALQ9NQG1 85 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
CPSF4-209ENST00000465132 F6UZH7 168 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 SLC17A3O00476 420 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 SNRPCP09234 159 aaKnown RBP12.87□□□□□ -0.35
CPSF4-209ENST00000465132 HLA-DRB4P13762 266 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 FGF8P55075 233 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-209ENST00000465132 RAB14P61106 215 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 MORN3Q6PF18 240 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-209ENST00000465132 SSX7Q7RTT5 188 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 RNF182Q8N6D2 247 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 PLA2G2EQ9NZK7 142 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 HLA-DRB4X5D2U9 266 aa12.87□□□□□ -0.35
CPSF4-209ENST00000465132 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 PGPA6NDG6 321 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
CPSF4-209ENST00000465132 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 C5orf17Q8NAS9 161 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 ZNF680Q8NEM1 530 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 KIR2DL5BQ8NHK3 375 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 C1QTNF4Q9BXJ3 329 aa12.86□□□□□ -0.35
CPSF4-209ENST00000465132 A0A0J9YX75 114 aa12.85□□□□□ -0.35
CPSF4-209ENST00000465132 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
CPSF4-209ENST00000465132 UBE2CO00762 179 aa12.85□□□□□ -0.35
CPSF4-209ENST00000465132 PMS2P11Q13670 270 aa12.85□□□□□ -0.35
CPSF4-209ENST00000465132 EXOC3-AS1Q8N2X6 119 aa12.85□□□□□ -0.35
CPSF4-209ENST00000465132 OR8A1Q8NGG7 326 aa12.85□□□□□ -0.35
CPSF4-209ENST00000465132 RBMY1BA6NDE4 496 aaKnown RBP12.84□□□□□ -0.35
CPSF4-209ENST00000465132 RBMY1EA6NEQ0 496 aaKnown RBP12.84□□□□□ -0.35
CPSF4-209ENST00000465132 EIF3GO75821 320 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPSF4-209ENST00000465132 AMBPP02760 352 aa12.84□□□□□ -0.35
CPSF4-209ENST00000465132 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
CPSF4-209ENST00000465132 RBMY1DP0C7P1 496 aaKnown RBP12.84□□□□□ -0.35
CPSF4-209ENST00000465132 ZNF767PQ75MW2 155 aa12.84□□□□□ -0.35
CPSF4-209ENST00000465132 LINC00477Q96M19 166 aa12.84□□□□□ -0.35
CPSF4-209ENST00000465132 H3BMM0 161 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 TSPOP30536 169 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 SUMO1P63165 101 aaKnown RBP12.83□□□□□ -0.36
CPSF4-209ENST00000465132 HIST1H1AQ02539 215 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-209ENST00000465132 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 CST9LP1Q5W188 147 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 C20orf173Q96LM9 149 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 WFDC10AQ9H1F0 79 aa12.83□□□□□ -0.36
CPSF4-209ENST00000465132 TMPRSS5Q9H3S3 457 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms