RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 C10orf55Q5SWW7 151 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 RNF125Q96EQ8 232 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 PCNTO95613 3336 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 IGHV3-21A0A0B4J1V1 117 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 TRAV8-4A0A0B4J246 113 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 XGP55808 180 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 SPANXN1Q5VSR9 72 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 Q6Q795 121 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 LINC00311Q8N616 119 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 C8orf31Q8N9H6 132 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 VKORC1Q9BQB6 163 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 TTTY13Q9BZ97 58 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 TMEM133Q9H2Q1 129 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 CDIP1Q9H305 208 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 EXPH5Q8NEV8 1989 aa3.07□□□□□ -1.92
CCNL1-204ENST00000464316 URB1O60287 2271 aaKnown RBP3.07□□□□□ -1.92
CCNL1-204ENST00000464316 WI2-2373I1.2A0A1W2PRP0 233 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF785A8K8V0 405 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 M0R1B8 84 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 RHODO00212 210 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 NTN3O00634 580 aaPredicted RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 FSTL3O95633 263 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 IGLV2-11P01706 119 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 HOXB4P17483 251 aaPredicted RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 HLA-DMBP28068 263 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 GATA4P43694 442 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 INSL3P51460 131 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 MFAP4P55083 255 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 DLX1P56177 255 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 NDUFV3P56181 108 aaKnown RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 SIGLEC15Q6ZMC9 328 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 PIP4P2Q8N4L2 257 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 PRR25Q96S07 402 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 HES7Q9BYE0 225 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 ONECUT1Q9UBC0 465 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 PRO0461Q9UI25 63 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 SLC25A20O43772 301 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 SLC25A16P16260 332 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 COL8A2P25067 703 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 PI4KAP42356 2102 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 FOXE3Q13461 319 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 RITA1Q96K30 269 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 RNF5Q99942 180 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 HEATR1Q9H583 2144 aaKnown RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 HIF1ANQ9NWT6 349 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 PRO1854Q9UHT4 67 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 DNAH3Q8TD57 4116 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 TRBV7-3A0A075B6L6 115 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 H3BRN7 92 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 LHBP01229 141 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 SRD5A1P18405 259 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 PRTN3P24158 256 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 HES1Q14469 280 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 ATXN8Q156A1 80 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 MRPL23Q16540 153 aaKnown RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 C1orf229Q6ZS94 237 aaPredicted RBP3.06□□□□□ -1.92
CCNL1-204ENST00000464316 FAM216BQ8N7L0 139 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 TIMD4Q96H15 378 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 A0A0C4DFX4 3053 aa3.06□□□□□ -1.92
CCNL1-204ENST00000464316 IGHV1-18A0A0C4DH31 117 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 EPOPA6NHQ4 379 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 C9JAW5 83 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 M0R3E3 92 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 IGLV1-44P01699 117 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 LGALS3P17931 250 aaKnown RBP3.05□□□□□ -1.92
CCNL1-204ENST00000464316 IGFBP4P22692 258 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 RPL32P62910 135 aaKnown RBP3.05□□□□□ -1.92
CCNL1-204ENST00000464316 DTX2Q86UW9 622 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 C8orf49Q96NF6 230 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 GAFA1Q96PS6 74 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 SLC50A1Q9BRV3 221 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 PRADC1Q9BSG0 188 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 ZNF256Q9Y2P7 627 aaPredicted RBP3.05□□□□□ -1.92
CCNL1-204ENST00000464316 TRAV2A0A0B4J234 112 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 LINC01546A6NGU7 62 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 M0QXV9 152 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 PRRG2O14669 202 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 CD40P25942 277 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 S100A4P26447 101 aaKnown RBP3.05□□□□□ -1.92
CCNL1-204ENST00000464316 MEIG1Q5JSS6 88 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 SFTA2Q6UW10 78 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 C10orf126Q8N4M7 172 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 MAPKAPK5-AS1Q8N8E1 139 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 GLMPQ8WWB7 406 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 MRPL36Q9P0J6 103 aaKnown RBP3.05□□□□□ -1.92
CCNL1-204ENST00000464316 SIGLEC9Q9Y336 463 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 FER1L5A0AVI2 2057 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 HCFC1P51610 2035 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 HTTP42858 3142 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 LY6G6EA0A0G2JKS1 128 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 FAM90A27PA6NNH2 459 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 IGLC6P0CF74 106 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 APELAP0DMC3 54 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 EGR2P11161 476 aaPredicted RBP3.05□□□□□ -1.92
CCNL1-204ENST00000464316 CRIP1P50238 77 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 FAM201AQ5SY85 155 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 U3KQA8 63 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 FREM1Q5H8C1 2179 aa3.05□□□□□ -1.92
CCNL1-204ENST00000464316 CEP350Q5VT06 3117 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms