RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SLC17A3O00476 420 aa13.29□□□□□ -0.28
SF3A1-205ENST00000463818 S100A10P60903 97 aa13.29□□□□□ -0.28
SF3A1-205ENST00000463818 SAT2Q96F10 170 aaPredicted RBP13.29□□□□□ -0.28
SF3A1-205ENST00000463818 WDR83OSQ9Y284 106 aa13.29□□□□□ -0.28
SF3A1-205ENST00000463818 A0A1B0GVY2 172 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 PRSS29PA6NIE9 313 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 F5H768 121 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 IGLC2P0DOY2 106 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 S100A11P31949 105 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 SULT1A1P50225 295 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 KIR3DS1Q14943 382 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 Q6ZR54 194 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 C15orf53Q8NAA6 179 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 OR1L4Q8NGR5 311 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 PXMP4Q9Y6I8 212 aa13.28□□□□□ -0.28
SF3A1-205ENST00000463818 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 CBY3A6NI87 242 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 RPL29P47914 159 aaKnown RBP13.27□□□□□ -0.29
SF3A1-205ENST00000463818 VWC2Q2TAL6 325 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 TMEM252Q8N6L7 170 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 C16orf74Q96GX8 76 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 PARD6GQ9BYG4 376 aaPredicted RBP13.27□□□□□ -0.29
SF3A1-205ENST00000463818 TIMM8BQ9Y5J9 83 aaPredicted RBP13.27□□□□□ -0.29
SF3A1-205ENST00000463818 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 FAT2Q9NYQ8 4349 aa13.27□□□□□ -0.29
SF3A1-205ENST00000463818 H7BYZ3 331 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 SIX6O95475 246 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 ATP5G1P05496 136 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 ATP5G3P48201 142 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 BAXQ07812 192 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 ZNF493Q6ZR52 646 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
SF3A1-205ENST00000463818 SLC39A9Q9NUM3 307 aa13.26□□□□□ -0.29
SF3A1-205ENST00000463818 UBE2L5PA0A1B0GUS4 154 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 H0YIZ8 118 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 SSNA1O43805 119 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 HBG1P69891 147 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 HBG2P69892 147 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 GUK1Q16774 197 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 RGS21Q2M5E4 152 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 STX12Q86Y82 276 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 CHAC2Q8WUX2 184 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 PFDN5Q99471 154 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 C20orf144Q9BQM9 153 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 ZNF586Q9NXT0 402 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 KIAA1109Q2LD37 5005 aa13.25□□□□□ -0.29
SF3A1-205ENST00000463818 E5RGE8 158 aa13.24□□□□□ -0.29
SF3A1-205ENST00000463818 CT45A10P0DMU9 189 aa13.24□□□□□ -0.29
SF3A1-205ENST00000463818 RNASE8Q8TDE3 154 aaKnown RBP13.24□□□□□ -0.29
SF3A1-205ENST00000463818 PPP1R1CQ8WVI7 109 aa13.24□□□□□ -0.29
SF3A1-205ENST00000463818 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
SF3A1-205ENST00000463818 KRTAP17-1Q9BYP8 105 aa13.24□□□□□ -0.29
SF3A1-205ENST00000463818 NUDT3O95989 172 aa13.23□□□□□ -0.29
SF3A1-205ENST00000463818 FGF7P21781 194 aa13.23□□□□□ -0.29
SF3A1-205ENST00000463818 FAM3BP58499 235 aaPredicted RBP13.23□□□□□ -0.29
SF3A1-205ENST00000463818 GFI1BQ5VTD9 330 aa13.23□□□□□ -0.29
SF3A1-205ENST00000463818 CCDC28AQ8IWP9 274 aa13.23□□□□□ -0.29
SF3A1-205ENST00000463818 TMEM263Q8WUH6 116 aaKnown RBP13.23□□□□□ -0.29
SF3A1-205ENST00000463818 J3KRW8 73 aa13.22□□□□□ -0.29
SF3A1-205ENST00000463818 MPC2O95563 127 aa13.22□□□□□ -0.29
SF3A1-205ENST00000463818 OR5AC2Q9NZP5 309 aa13.22□□□□□ -0.29
SF3A1-205ENST00000463818 TRBV19A0A075B6N1 114 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 ZNF253O75346 499 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 RLN2P04090 185 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 PET100P0DJ07 73 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 LEPP41159 167 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 ASB13Q8WXK3 278 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.29
SF3A1-205ENST00000463818 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
SF3A1-205ENST00000463818 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
SF3A1-205ENST00000463818 NHLH2Q02577 135 aa13.2□□□□□ -0.3
SF3A1-205ENST00000463818 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
SF3A1-205ENST00000463818 C1orf134Q5TEV5 83 aa13.2□□□□□ -0.3
SF3A1-205ENST00000463818 ODF3Q96PU9 254 aa13.2□□□□□ -0.3
SF3A1-205ENST00000463818 M0R3E3 92 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 MPDU1O75352 247 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 NDUFB4O95168 129 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 ERCC8Q13216 396 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 LRRC37A5PQ49AS3 106 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 MRPL53Q96EL3 112 aaKnown RBP13.19□□□□□ -0.3
SF3A1-205ENST00000463818 NPCDR1Q9BY65 106 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 SLC25A31Q9H0C2 315 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 TIMM9Q9Y5J7 89 aa13.19□□□□□ -0.3
SF3A1-205ENST00000463818 PYYP10082 97 aa13.18□□□□□ -0.3
SF3A1-205ENST00000463818 OR5I1Q13606 314 aa13.18□□□□□ -0.3
SF3A1-205ENST00000463818 LINC00612Q8N6U2 182 aa13.18□□□□□ -0.3
SF3A1-205ENST00000463818 ZNRF2Q8NHG8 242 aa13.18□□□□□ -0.3
SF3A1-205ENST00000463818 DNAH11Q96DT5 4516 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 SNURFLB1AK76 121 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 GAGE7O76087 117 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 GAGE12FP0CL80 117 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 GAGE12GP0CL81 117 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 GAGE12IP0CL82 117 aa13.17□□□□□ -0.3
SF3A1-205ENST00000463818 CCL18P55774 89 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms