RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ZBTB8BQ8NAP8 495 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-204ENST00000463684 RABL2AQ9UBK7 228 aaPredicted RBP9.81□□□□□ -0.84
SMC1A-204ENST00000463684 PRO0255Q9UI72 69 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 RABL2BQ9UNT1 228 aa9.81□□□□□ -0.84
SMC1A-204ENST00000463684 KRTAP29-1A8MX34 341 aaPredicted RBP9.8□□□□□ -0.84
SMC1A-204ENST00000463684 CTDSP2O14595 271 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 CT45A10P0DMU9 189 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 VAMP1P23763 118 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 CTF1Q16619 201 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 SERTAD4-AS1Q5TG53 156 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 NEGR1Q7Z3B1 354 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 LINC00305Q7Z4B0 112 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 LRTM2Q8N967 370 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 DIRAS2Q96HU8 199 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 LINC00467Q9BRT7 94 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 PXMP4Q9Y6I8 212 aa9.8□□□□□ -0.84
SMC1A-204ENST00000463684 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
SMC1A-204ENST00000463684 PXDC1Q5TGL8 231 aa9.79□□□□□ -0.84
SMC1A-204ENST00000463684 ST6GAL2Q96JF0 529 aa9.79□□□□□ -0.84
SMC1A-204ENST00000463684 NAA50Q9GZZ1 169 aaKnown RBP9.79□□□□□ -0.84
SMC1A-204ENST00000463684 NPVFQ9HCQ7 196 aa9.79□□□□□ -0.84
SMC1A-204ENST00000463684 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
SMC1A-204ENST00000463684 LINC00854A0A1B0GVQ3 168 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 H3BTX0 84 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 SLC17A3O00476 420 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 GOSR2O14653 212 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 PSCAO43653 123 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 PRAF2O60831 178 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 IGHV3-53P01767 116 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 SLC25A5P05141 298 aaKnown RBP9.78□□□□□ -0.84
SMC1A-204ENST00000463684 HOXB5P09067 269 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 RRAS2P62070 204 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-204ENST00000463684 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 TEPPQ6URK8 271 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 EIF4E3Q8N5X7 224 aaKnown RBP9.78□□□□□ -0.84
SMC1A-204ENST00000463684 C11orf72Q8NBR9 251 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 NTN5Q8WTR8 489 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-204ENST00000463684 PSENENQ9NZ42 101 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 KLF12Q9Y4X4 402 aa9.78□□□□□ -0.84
SMC1A-204ENST00000463684 C7orf71A4D174 169 aa9.77□□□□□ -0.85
SMC1A-204ENST00000463684 SPINK4O60575 86 aa9.77□□□□□ -0.85
SMC1A-204ENST00000463684 CRYBA4P53673 196 aa9.77□□□□□ -0.85
SMC1A-204ENST00000463684 C4orf46Q504U0 113 aa9.77□□□□□ -0.85
SMC1A-204ENST00000463684 C8orf49Q96NF6 230 aa9.77□□□□□ -0.85
SMC1A-204ENST00000463684 RSL24D1Q9UHA3 163 aaKnown RBP9.77□□□□□ -0.85
SMC1A-204ENST00000463684 K7EPK0 472 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 COX7A2P2O60397 106 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 FAUP35544 74 aaKnown RBP9.76□□□□□ -0.85
SMC1A-204ENST00000463684 TCL1AP56279 114 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 SLC38A11Q08AI6 406 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 C10orf126Q8N4M7 172 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 SAT2Q96F10 170 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-204ENST00000463684 MGAT4CQ9UBM8 478 aa9.76□□□□□ -0.85
SMC1A-204ENST00000463684 FNDC10F2Z333 226 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 MPDU1O75352 247 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 SFT2D2O95562 160 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 CRYGDP07320 174 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 SRIP30626 198 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 POLR2GP62487 172 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMC1A-204ENST00000463684 ID3Q02535 119 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 GUK1Q16774 197 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 ZNF546Q86UE3 836 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 VGLL1Q99990 258 aa9.75□□□□□ -0.85
SMC1A-204ENST00000463684 MRPL32Q9BYC8 188 aaKnown RBP9.75□□□□□ -0.85
SMC1A-204ENST00000463684 CCDC59Q9P031 241 aaKnown RBP9.75□□□□□ -0.85
SMC1A-204ENST00000463684 TRGV4A0A0C4DH28 118 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 E5RGE8 158 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 H3BQ15 152 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 IGLC2P0DOY2 106 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 RNASE4P34096 147 aaKnown RBP9.74□□□□□ -0.85
SMC1A-204ENST00000463684 FHL2Q14192 279 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 IBA57Q5T440 356 aaKnown RBP9.74□□□□□ -0.85
SMC1A-204ENST00000463684 C10orf113Q5VZT2 155 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 PCNPQ8WW12 178 aaKnown RBP9.74□□□□□ -0.85
SMC1A-204ENST00000463684 SMIM8Q96KF7 97 aa9.74□□□□□ -0.85
SMC1A-204ENST00000463684 MRPL16Q9NX20 251 aaKnown RBP9.74□□□□□ -0.85
SMC1A-204ENST00000463684 K7EQD1 137 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 AGPAT2O15120 278 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 SSSCA1O60232 199 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 CCNKO75909 580 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 GPX1P07203 203 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 METTL15P1P0C7V9 234 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 CD300CQ08708 224 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 ERCC8Q13216 396 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 BTN1A1Q13410 526 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 PPP1R1AQ13522 171 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 OPCMLQ14982 345 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 TMEM37Q8WXS4 190 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 LINC00477Q96M19 166 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
SMC1A-204ENST00000463684 LRCOL1A6NCL2 159 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 KLLNB2CW77 178 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 RGS13O14921 159 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 C1QBP02746 253 aa9.72□□□□□ -0.85
SMC1A-204ENST00000463684 MORN5Q5VZ52 161 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms