RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 GCSAMLQ5JQS6 135 aa11.63□□□□□ -0.55
COL1A1-202ENST00000463440 DKK2Q9UBU2 259 aa11.63□□□□□ -0.55
COL1A1-202ENST00000463440 DNAH1Q9P2D7 4330 aa11.63□□□□□ -0.55
COL1A1-202ENST00000463440 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 IFNA5P01569 189 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
COL1A1-202ENST00000463440 CDKN1BP46527 198 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 PDE6HQ13956 83 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 FAM222AQ5U5X8 452 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 TMEM256Q8N2U0 113 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 SCGB1C1Q8TD33 95 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
COL1A1-202ENST00000463440 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 PYYP10082 97 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 TSPOP30536 169 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 MRPL53Q96EL3 112 aaKnown RBP11.61□□□□□ -0.55
COL1A1-202ENST00000463440 LINC01587Q99440 93 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 NIPSNAP3BQ9BS92 247 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 MRPL32Q9BYC8 188 aaKnown RBP11.61□□□□□ -0.55
COL1A1-202ENST00000463440 MED28Q9H204 178 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 APLNQ9ULZ1 77 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 PRELID1Q9Y255 219 aa11.61□□□□□ -0.55
COL1A1-202ENST00000463440 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
COL1A1-202ENST00000463440 IGHV4-4A0A075B6R2 117 aa11.6□□□□□ -0.55
COL1A1-202ENST00000463440 ZNF705GA8MUZ8 300 aaPredicted RBP11.6□□□□□ -0.55
COL1A1-202ENST00000463440 MIR17HGQ75NE6 70 aa11.6□□□□□ -0.55
COL1A1-202ENST00000463440 RPP25LQ8N5L8 163 aaKnown RBP11.6□□□□□ -0.55
COL1A1-202ENST00000463440 BLNKQ8WV28 456 aa11.6□□□□□ -0.55
COL1A1-202ENST00000463440 SLC25A2Q9BXI2 301 aa11.6□□□□□ -0.55
COL1A1-202ENST00000463440 SMIM3Q9BZL3 60 aa11.6□□□□□ -0.55
COL1A1-202ENST00000463440 FUT9Q9Y231 359 aa11.6□□□□□ -0.55
COL1A1-202ENST00000463440 OXA1LQ15070 435 aa11.59□□□□□ -0.55
COL1A1-202ENST00000463440 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
COL1A1-202ENST00000463440 FAM167A-AS1Q96KT0 104 aa11.59□□□□□ -0.55
COL1A1-202ENST00000463440 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-202ENST00000463440 OR51M1Q9H341 326 aa11.59□□□□□ -0.55
COL1A1-202ENST00000463440 AAMDCQ9H7C9 122 aa11.59□□□□□ -0.55
COL1A1-202ENST00000463440 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 NDUFB4O95168 129 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 TAS2R60P59551 318 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 DAD1P61803 113 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 FCN2Q15485 313 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 C20orf144Q9BQM9 153 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 PAXXQ9BUH6 204 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 HYDINQ4G0P3 5121 aa11.58□□□□□ -0.56
COL1A1-202ENST00000463440 LYRM9A8MSI8 78 aa11.57□□□□□ -0.56
COL1A1-202ENST00000463440 M0R3E3 92 aa11.57□□□□□ -0.56
COL1A1-202ENST00000463440 PRM2P04554 102 aa11.57□□□□□ -0.56
COL1A1-202ENST00000463440 NBEAP1P0C6P0 100 aa11.57□□□□□ -0.56
COL1A1-202ENST00000463440 LEPP41159 167 aa11.57□□□□□ -0.56
COL1A1-202ENST00000463440 NDUFAF3Q9BU61 184 aa11.57□□□□□ -0.56
COL1A1-202ENST00000463440 H7BYZ3 331 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 OR7C2O60412 319 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 CT45A10P0DMU9 189 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 HTN1P15515 57 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 RNF141Q8WVD5 230 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 ASB13Q8WXK3 278 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 C16orf74Q96GX8 76 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
COL1A1-202ENST00000463440 OR10J4P0C629 311 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 HTN3P15516 51 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 AZU1P20160 251 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 TAS2R45P59539 299 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 ICAM4Q14773 271 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 KHDC3LQ587J8 217 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 ZNF493Q6ZR52 646 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 FXYD5Q96DB9 178 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 FAM210BQ96KR6 192 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
COL1A1-202ENST00000463440 J3KRW8 73 aa11.54□□□□□ -0.56
COL1A1-202ENST00000463440 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-202ENST00000463440 ERCC8Q13216 396 aa11.54□□□□□ -0.56
COL1A1-202ENST00000463440 KIR3DS1Q14943 382 aa11.54□□□□□ -0.56
COL1A1-202ENST00000463440 RGS21Q2M5E4 152 aa11.54□□□□□ -0.56
COL1A1-202ENST00000463440 ACOT6Q3I5F7 207 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-202ENST00000463440 FAM122CQ6P4D5 195 aa11.54□□□□□ -0.56
COL1A1-202ENST00000463440 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
COL1A1-202ENST00000463440 PLAC8L1A1L4L8 177 aa11.53□□□□□ -0.56
COL1A1-202ENST00000463440 UBE2L3P68036 154 aaKnown RBP11.53□□□□□ -0.56
COL1A1-202ENST00000463440 ZNF266Q14584 549 aa11.53□□□□□ -0.56
COL1A1-202ENST00000463440 LYPD1Q8N2G4 141 aa11.53□□□□□ -0.56
COL1A1-202ENST00000463440 TMEM263Q8WUH6 116 aaKnown RBP11.53□□□□□ -0.56
COL1A1-202ENST00000463440 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
COL1A1-202ENST00000463440 TIMM8BQ9Y5J9 83 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-202ENST00000463440 TRAV12-3A0A0B4J271 114 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 A0A1W2PPV4 95 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
COL1A1-202ENST00000463440 DEFB130BP0DP73 79 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 DEFB130AP0DP74 79 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 M6PRP20645 277 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 TMEM78Q5T7P6 136 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 C9orf47Q6ZRZ4 202 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 RNASE8Q8TDE3 154 aaKnown RBP11.52□□□□□ -0.57
COL1A1-202ENST00000463440 ZNF503Q96F45 646 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 PHYHIPLQ96FC7 376 aa11.52□□□□□ -0.57
COL1A1-202ENST00000463440 AGPAT4-IT1Q9H0P7 198 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms