RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 ICAM4Q14773 271 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 TCTE3Q8IZS6 198 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 GNPNAT1Q96EK6 184 aaPredicted RBP12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 ARPC5LQ9BPX5 153 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 X6R8D5 127 aa12.09□□□□□ -0.47
HLA-DPA1-245ENST00000463066 TAAR5O14804 337 aa12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 CDC34P49427 236 aaPredicted RBP12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 NUTF2P61970 127 aaKnown RBP12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ZNF345Q14585 488 aa12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ZFAND6Q6FIF0 208 aa12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
HLA-DPA1-245ENST00000463066 BCL2L11O43521 198 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 JTBO76095 146 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 TAS2R45P59539 299 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 SERF2P84101 59 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ERCC8Q13216 396 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PDE6HQ13956 83 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ZNF726P1Q15940 193 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 TMEM41BQ5BJD5 291 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 BAP18Q8IXM2 172 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 C1orf158Q8N1D5 194 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
HLA-DPA1-245ENST00000463066 TRAV12-2A0A075B6T6 113 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 A0A0D9SG52 128 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 BOLA2-SMG1P6H3BVE0 249 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 CRXO43186 299 aaPredicted RBP12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 AKAP14Q86UN6 197 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 Q8NAQ8 132 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 C1QTNF4Q9BXJ3 329 aa12.06□□□□□ -0.48
HLA-DPA1-245ENST00000463066 IGKV2-40A0A087WW87 121 aaPredicted RBP12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ZNF705EA8MWA4 302 aaPredicted RBP12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 IGKV2D-40P01614 121 aaPredicted RBP12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 STAG3L2P0CL84 134 aa12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 STAG3L3P0CL85 134 aa12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 LGALSLQ3ZCW2 172 aaPredicted RBP12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 OR10J6PQ8NGY7 276 aa12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ACTR3CQ9C0K3 210 aaPredicted RBP12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 Q9H3A6 140 aa12.05□□□□□ -0.48
HLA-DPA1-245ENST00000463066 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 NPIPB6E9PJ23 425 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 MBP02144 154 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PRM2P04554 102 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 CT45A10P0DMU9 189 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 IGF2BP2-AS1Q96M15 143 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PPP1R14DQ9NXH3 145 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
HLA-DPA1-245ENST00000463066 DNAH7Q8WXX0 4024 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 J3KRW8 73 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 PFDN1O60925 122 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 C1QBP02746 253 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 GCHFRP30047 84 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 AKR1C8PQ5T2L2 129 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 VGLL1Q99990 258 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 AGPAT4-IT1Q9H0P7 198 aa12.03□□□□□ -0.48
HLA-DPA1-245ENST00000463066 FHITP49789 147 aa12.02□□□□□ -0.49
HLA-DPA1-245ENST00000463066 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
HLA-DPA1-245ENST00000463066 IL17DQ8TAD2 202 aa12.02□□□□□ -0.49
HLA-DPA1-245ENST00000463066 HYLS1Q96M11 299 aa12.02□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
HLA-DPA1-245ENST00000463066 PGPA6NDG6 321 aa12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 INSP01308 110 aa12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 IQCF2Q8IXL9 164 aa12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 C11orf68Q9H3H3 251 aaKnown RBP12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 RPH3ALQ9UNE2 315 aa12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
HLA-DPA1-245ENST00000463066 CTXND1A0A1B0GTU2 59 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 ZNF705GA8MUZ8 300 aaPredicted RBP12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 C3orf84H3BNL1 204 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 AMBPP02760 352 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 MIFP14174 115 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 GNG5P63218 68 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 Q8TAT8 98 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TMED6Q8WW62 240 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 OTORQ9NRC9 128 aa12□□□□□ -0.49
HLA-DPA1-245ENST00000463066 CXorf1O96002 111 aa11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 CDKN1BP46527 198 aa11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 NANOS2P60321 138 aaKnown RBP11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 CASC10Q5T4H9 136 aa11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 LYPD1Q8N2G4 141 aa11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 SUN5Q8TC36 379 aa11.99□□□□□ -0.49
HLA-DPA1-245ENST00000463066 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms