RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
SND1-203ENST00000463020 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
SND1-203ENST00000463020 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
SND1-203ENST00000463020 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
SND1-203ENST00000463020 ICAM4Q14773 271 aa11.22□□□□□ -0.61
SND1-203ENST00000463020 ACOT6Q3I5F7 207 aaPredicted RBP11.22□□□□□ -0.61
SND1-203ENST00000463020 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
SND1-203ENST00000463020 ZNF600Q6ZNG1 722 aa11.22□□□□□ -0.61
SND1-203ENST00000463020 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
SND1-203ENST00000463020 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
SND1-203ENST00000463020 CTXND1A0A1B0GTU2 59 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 ATP5IP56385 69 aaPredicted RBP11.21□□□□□ -0.61
SND1-203ENST00000463020 DLK1P80370 383 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 FLI1Q01543 452 aaPredicted RBP11.21□□□□□ -0.61
SND1-203ENST00000463020 LGALS9BQ3B8N2 356 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
SND1-203ENST00000463020 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.61
SND1-203ENST00000463020 FNDC4Q9H6D8 234 aaPredicted RBP11.21□□□□□ -0.61
SND1-203ENST00000463020 P0DMU3 169 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 FAM231AP0DMU4 169 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 FAM231CP0DMU5 169 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 BCL2P10415 239 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 FAM122CQ6P4D5 195 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 OR10G9Q8NGN4 311 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 NDUFAF3Q9BU61 184 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 NPCDR1Q9BY65 106 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 VAX2Q9UIW0 290 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
SND1-203ENST00000463020 SMCO3A2RU48 225 aa11.19□□□□□ -0.62
SND1-203ENST00000463020 CRYBB3P26998 211 aa11.19□□□□□ -0.62
SND1-203ENST00000463020 DEFB1P60022 68 aa11.19□□□□□ -0.62
SND1-203ENST00000463020 RAB31Q13636 194 aa11.19□□□□□ -0.62
SND1-203ENST00000463020 NIPSNAP3BQ9BS92 247 aa11.19□□□□□ -0.62
SND1-203ENST00000463020 XCL2Q9UBD3 114 aa11.19□□□□□ -0.62
SND1-203ENST00000463020 ZFP92A6NM28 416 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 NDUFS6O75380 124 aaKnown RBP11.18□□□□□ -0.62
SND1-203ENST00000463020 IGKV1-17P01599 117 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 RNASE2P10153 161 aaKnown RBP11.18□□□□□ -0.62
SND1-203ENST00000463020 NPPCP23582 126 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 NPY1RP25929 384 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 PSMB3P49720 205 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 CEBPGP53567 150 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 ZNF726P1Q15940 193 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 TIGITQ495A1 244 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 PSMG4Q5JS54 123 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 SLC24A4Q8NFF2 622 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
SND1-203ENST00000463020 H3BQ15 152 aa11.17□□□□□ -0.62
SND1-203ENST00000463020 OPRK1P41145 380 aa11.17□□□□□ -0.62
SND1-203ENST00000463020 FGF8P55075 233 aaPredicted RBP11.17□□□□□ -0.62
SND1-203ENST00000463020 CYB561D1Q8N8Q1 229 aa11.17□□□□□ -0.62
SND1-203ENST00000463020 U3KQE9 123 aa11.17□□□□□ -0.62
SND1-203ENST00000463020 A0A1W2PPV4 95 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 B4DEV8 164 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 FNDC10F2Z333 226 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 EMP1P54849 157 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 PNRC1Q12796 327 aaPredicted RBP11.16□□□□□ -0.62
SND1-203ENST00000463020 GLMPQ8WWB7 406 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 METTL26Q96S19 204 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 NPVFQ9HCQ7 196 aa11.16□□□□□ -0.62
SND1-203ENST00000463020 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 A0A087WWC5 75 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 COLCA2A8K830 154 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 CLN5O75503 358 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 CDC34P49427 236 aaPredicted RBP11.15□□□□□ -0.62
SND1-203ENST00000463020 FXYD7P58549 80 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 ERHP84090 104 aaKnown RBP11.15□□□□□ -0.62
SND1-203ENST00000463020 GDF5OSQ5U4N7 250 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
SND1-203ENST00000463020 HELTA6NFD8 242 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 H3BMM0 161 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 AKR1C3P42330 323 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 RAB5BP61020 215 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 RNF212Q495C1 297 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 ZNF705AQ6ZN79 300 aaPredicted RBP11.14□□□□□ -0.63
SND1-203ENST00000463020 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 OR4X1Q8NH49 305 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
SND1-203ENST00000463020 A0A1W2PS18 150 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 ZNF705FA8MVS1 300 aaPredicted RBP11.13□□□□□ -0.63
SND1-203ENST00000463020 C1orf196B1AJZ1 125 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 PRSS46E5RG02 174 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 ZNF705DP0CH99 300 aaPredicted RBP11.13□□□□□ -0.63
SND1-203ENST00000463020 ZNF705BP0CI00 300 aaPredicted RBP11.13□□□□□ -0.63
SND1-203ENST00000463020 MEF2BQ02080 365 aaPredicted RBP11.13□□□□□ -0.63
SND1-203ENST00000463020 TNP2Q05952 138 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 USF2Q15853 346 aaPredicted RBP11.13□□□□□ -0.63
SND1-203ENST00000463020 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 UBE2DNLQ8IWF7 75 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms