RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
COL9A3-203ENST00000462700 NDUFB4O95168 129 aa13.54□□□□□ -0.24
COL9A3-203ENST00000462700 HBE1P02100 147 aa13.54□□□□□ -0.24
COL9A3-203ENST00000462700 BLNKQ8WV28 456 aa13.54□□□□□ -0.24
COL9A3-203ENST00000462700 MRPL53Q96EL3 112 aaKnown RBP13.54□□□□□ -0.24
COL9A3-203ENST00000462700 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
COL9A3-203ENST00000462700 TIMM9Q9Y5J7 89 aa13.54□□□□□ -0.24
COL9A3-203ENST00000462700 DNAH1Q9P2D7 4330 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 TRAV12-2A0A075B6T6 113 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 TMEM189A5PLL7 270 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 TMEM208Q9BTX3 173 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 OR51M1Q9H341 326 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 ALMS1Q8TCU4 4167 aa13.53□□□□□ -0.24
COL9A3-203ENST00000462700 M0R3E3 92 aa13.52□□□□□ -0.25
COL9A3-203ENST00000462700 Q6ZTC4 211 aa13.52□□□□□ -0.25
COL9A3-203ENST00000462700 PAXXQ9BUH6 204 aa13.52□□□□□ -0.25
COL9A3-203ENST00000462700 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 C11orf94C9JXX5 98 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 NBEAP1P0C6P0 100 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 CDKN1BP46527 198 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 EMP1P54849 157 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 ZNF266Q14584 549 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 FXYD5Q96DB9 178 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 PRELID1Q9Y255 219 aa13.51□□□□□ -0.25
COL9A3-203ENST00000462700 NPIPB6E9PJ23 425 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 OR7C2O60412 319 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 OR10J4P0C629 311 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 C12orf74Q32Q52 190 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 EXOC3-AS1Q8N2X6 119 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 RPP25LQ8N5L8 163 aaKnown RBP13.5□□□□□ -0.25
COL9A3-203ENST00000462700 OR2T35Q8NGX2 323 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 C2CD4CQ8TF44 421 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 RNF141Q8WVD5 230 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 ZNF503Q96F45 646 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 AAMDCQ9H7C9 122 aa13.5□□□□□ -0.25
COL9A3-203ENST00000462700 RNF222A6NCQ9 220 aa13.49□□□□□ -0.25
COL9A3-203ENST00000462700 SPART-AS1P0CW21 52 aa13.49□□□□□ -0.25
COL9A3-203ENST00000462700 ACOT6Q3I5F7 207 aaPredicted RBP13.49□□□□□ -0.25
COL9A3-203ENST00000462700 ZNF767PQ75MW2 155 aa13.49□□□□□ -0.25
COL9A3-203ENST00000462700 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
COL9A3-203ENST00000462700 HYDINQ4G0P3 5121 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 FXYD6-FXYD2A0A087WZ82 144 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 TRAV10A0A0B4J240 114 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 ZNF705GA8MUZ8 300 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-203ENST00000462700 CT45A10P0DMU9 189 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 M6PRP20645 277 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 TSPOP30536 169 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 TAS2R45P59539 299 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 ICAM4Q14773 271 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 KHDC3LQ587J8 217 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 TMEM256Q8N2U0 113 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 INO80EQ8NBZ0 244 aaPredicted RBP13.48□□□□□ -0.25
COL9A3-203ENST00000462700 PHYHIPLQ96FC7 376 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 ODF3Q96PU9 254 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 DKK2Q9UBU2 259 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 TNFSF18Q9UNG2 199 aa13.48□□□□□ -0.25
COL9A3-203ENST00000462700 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
COL9A3-203ENST00000462700 TEX48A0A1B0GUV7 120 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 G3V3Q6 166 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 PRM2P04554 102 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 RAB2AP61019 212 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 UBE2L3P68036 154 aaKnown RBP13.47□□□□□ -0.25
COL9A3-203ENST00000462700 KIR3DS1Q14943 382 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 HSD17B11Q8NBQ5 300 aa13.47□□□□□ -0.25
COL9A3-203ENST00000462700 EIF3GO75821 320 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL9A3-203ENST00000462700 LEPP41159 167 aa13.46□□□□□ -0.25
COL9A3-203ENST00000462700 GFI1BQ5VTD9 330 aa13.46□□□□□ -0.25
COL9A3-203ENST00000462700 FAM122CQ6P4D5 195 aa13.46□□□□□ -0.25
COL9A3-203ENST00000462700 OR2G3Q8NGZ4 309 aa13.46□□□□□ -0.25
COL9A3-203ENST00000462700 LINC01587Q99440 93 aa13.46□□□□□ -0.25
COL9A3-203ENST00000462700 C20orf144Q9BQM9 153 aa13.46□□□□□ -0.25
COL9A3-203ENST00000462700 PSMG3Q9BT73 122 aaPredicted RBP13.46□□□□□ -0.25
COL9A3-203ENST00000462700 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 ATP6V0CP27449 155 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 TAS2R60P59551 318 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 ERCC8Q13216 396 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 LCE2DQ5TA82 110 aaPredicted RBP13.45□□□□□ -0.26
COL9A3-203ENST00000462700 OR10G4Q8NGN3 311 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 OR10G9Q8NGN4 311 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 OR10G7Q8NGN6 311 aa13.45□□□□□ -0.26
COL9A3-203ENST00000462700 IGKV2-40A0A087WW87 121 aaPredicted RBP13.44□□□□□ -0.26
COL9A3-203ENST00000462700 DEFB131BA0A096LNP1 70 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 IGLL5B9A064 214 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 LY6G6CO95867 125 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 IGKV2D-40P01614 121 aaPredicted RBP13.44□□□□□ -0.26
COL9A3-203ENST00000462700 AZU1P20160 251 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 TCTAP57738 103 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 LYPD1Q8N2G4 141 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 LINC00477Q96M19 166 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 NIPSNAP3BQ9BS92 247 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 AGPAT4-IT1Q9H0P7 198 aa13.44□□□□□ -0.26
COL9A3-203ENST00000462700 H7BYZ3 331 aa13.43□□□□□ -0.26
COL9A3-203ENST00000462700 J3KRW8 73 aa13.43□□□□□ -0.26
COL9A3-203ENST00000462700 RANP62826 216 aaKnown RBP13.43□□□□□ -0.26
COL9A3-203ENST00000462700 RPL7L1Q6DKI1 246 aaKnown RBP13.43□□□□□ -0.26
COL9A3-203ENST00000462700 PQLC2Q6ZP29 291 aa13.43□□□□□ -0.26
COL9A3-203ENST00000462700 C9orf47Q6ZRZ4 202 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms