RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 LYZL1Q6UWQ5 148 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 NPSP0C0P6 89 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 FAM106CPP0CH98 169 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 Q6AWC8 147 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 Q8N9W7 124 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 Q8TAT8 98 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.29
ACTB-207ENST00000462494 hDV102S1A0JD36 115 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 SIRPDQ9H106 197 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 GOLT1BQ9Y3E0 138 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 A0A1B0GW15 77 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 TMEM213A2RRL7 107 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 OR5AL1P0C617 328 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 GPR183P32249 361 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 SMAD5-AS1Q9Y6J3 95 aa13.2□□□□□ -0.3
ACTB-207ENST00000462494 UNQ5815/PRO19632Q6UWF5 114 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 VGLL1Q99990 258 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 AP5S1Q9NUS5 200 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 HSPB8Q9UJY1 196 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 MRPS16Q9Y3D3 137 aaKnown RBP13.19□□□□□ -0.3
ACTB-207ENST00000462494 C15orf32Q32M92 178 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 CYB5R2Q6BCY4 276 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 PRR25Q96S07 402 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 TMEM191AQ9H0A3 160 aa13.19□□□□□ -0.3
ACTB-207ENST00000462494 LOC389332A0A1B0GUA5 103 aa13.18□□□□□ -0.3
ACTB-207ENST00000462494 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
ACTB-207ENST00000462494 PMCHL2Q9BQD1 86 aa13.18□□□□□ -0.3
ACTB-207ENST00000462494 IGHV2-70DA0A0C4DH43 119 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 LY6DQ14210 128 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 GATD1Q8NB37 220 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 ZFHX3Q15911 3703 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 D6R8Y8 96 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 GAGE1Q13065 139 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
ACTB-207ENST00000462494 HSBP1L1C9JCN9 74 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 ATP6V0E1O15342 81 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 CLEC3BP05452 202 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 SAA4P35542 130 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 IFI27P40305 119 aaPredicted RBP13.16□□□□□ -0.3
ACTB-207ENST00000462494 UBE2E1P51965 193 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 RHOGP84095 191 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
ACTB-207ENST00000462494 IGHV3-66A0A0C4DH42 116 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
ACTB-207ENST00000462494 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 PET117Q6UWS5 81 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
ACTB-207ENST00000462494 CACNA1BQ00975 2339 aa13.15□□□□□ -0.3
ACTB-207ENST00000462494 AKAP6Q13023 2319 aa13.15□□□□□ -0.3
ACTB-207ENST00000462494 IGHG4P01861 327 aa13.15□□□□□ -0.3
ACTB-207ENST00000462494 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
ACTB-207ENST00000462494 G3V318 75 aa13.15□□□□□ -0.31
ACTB-207ENST00000462494 TWIST1Q15672 202 aa13.15□□□□□ -0.31
ACTB-207ENST00000462494 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.31
ACTB-207ENST00000462494 AJUBAQ96IF1 538 aa13.15□□□□□ -0.31
ACTB-207ENST00000462494 BPESC1Q9GZL8 116 aa13.15□□□□□ -0.31
ACTB-207ENST00000462494 SPTBN4Q9H254 2564 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 HIVEP3Q5T1R4 2406 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 IGHV3OR16-13A0A075B7E8 117 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 IGHV3-74A0A0B4J1X5 117 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 LINC01548A6NM66 108 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 EFNA4P52798 201 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 ERCC8Q13216 396 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 FAM104BQ5XKR9 115 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 Q6ZVH6 145 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 OR10AG1Q8NH19 301 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 PRELID3AQ96N28 172 aa13.14□□□□□ -0.31
ACTB-207ENST00000462494 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 CLEC19AQ6UXS0 136 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 RNF182Q8N6D2 247 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 FER1L6-AS1Q8NA97 138 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 ORM1P02763 201 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 S100A7P31151 101 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 BMI1P35226 326 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 LOXL1Q08397 574 aaPredicted RBP13.13□□□□□ -0.31
ACTB-207ENST00000462494 ORMDL3Q8N138 153 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 ZNF747Q9BV97 191 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 SIGLEC8Q9NYZ4 499 aa13.13□□□□□ -0.31
ACTB-207ENST00000462494 MRPL51Q4U2R6 128 aaKnown RBP13.12□□□□□ -0.31
ACTB-207ENST00000462494 PRAC2D3DTV9 90 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 GOSR1O95249 250 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 FXYD7P58549 80 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 COX8CQ7Z4L0 72 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
ACTB-207ENST00000462494 IGHV3-49A0A0A0MS15 119 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
ACTB-207ENST00000462494 BUB3O43684 328 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 LMO4P61968 165 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 SLC25A34Q6PIV7 304 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 ARL6IP6Q8N6S5 226 aa13.11□□□□□ -0.31
ACTB-207ENST00000462494 ZNF207O43670 478 aaKnown RBP13.11□□□□□ -0.31
ACTB-207ENST00000462494 NCR2O95944 276 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms