RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 ZNF253O75346 499 aa13.53□□□□□ -0.24
SLC6A1-204ENST00000462473 IFNA5P01569 189 aa13.53□□□□□ -0.24
SLC6A1-204ENST00000462473 PYYP10082 97 aa13.53□□□□□ -0.24
SLC6A1-204ENST00000462473 SCGB1C1Q8TD33 95 aa13.53□□□□□ -0.24
SLC6A1-204ENST00000462473 MED28Q9H204 178 aa13.53□□□□□ -0.24
SLC6A1-204ENST00000462473 TIMM9Q9Y5J7 89 aa13.53□□□□□ -0.24
SLC6A1-204ENST00000462473 TRBV19A0A075B6N1 114 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 DEFB131BA0A096LNP1 70 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 CDKN1BP46527 198 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 LGALS9CQ6DKI2 356 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 MIR17HGQ75NE6 70 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 BLNKQ8WV28 456 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 LINC01587Q99440 93 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 SLC25A2Q9BXI2 301 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 DKK2Q9UBU2 259 aa13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 YTHDF2Q9Y5A9 579 aaKnown RBP13.52□□□□□ -0.25
SLC6A1-204ENST00000462473 ZNF705GA8MUZ8 300 aaPredicted RBP13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 PDE6HQ13956 83 aa13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 FCN2Q15485 313 aa13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 RPP25LQ8N5L8 163 aaKnown RBP13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 APLNQ9ULZ1 77 aa13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 DNAH1Q9P2D7 4330 aa13.51□□□□□ -0.25
SLC6A1-204ENST00000462473 ALMS1Q8TCU4 4167 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 PRM2P04554 102 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 TSPOP30536 169 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 FAM167A-AS1Q96KT0 104 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 NIPSNAP3BQ9BS92 247 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 OR51M1Q9H341 326 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 FUT9Q9Y231 359 aa13.5□□□□□ -0.25
SLC6A1-204ENST00000462473 IGHV4-4A0A075B6R2 117 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 NDUFB4O95168 129 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 FFAR4Q5NUL3 377 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 TMEM256Q8N2U0 113 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 MRPL53Q96EL3 112 aaKnown RBP13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 PLA2G2EQ9NZK7 142 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 PRELID1Q9Y255 219 aa13.49□□□□□ -0.25
SLC6A1-204ENST00000462473 M0R3E3 92 aa13.48□□□□□ -0.25
SLC6A1-204ENST00000462473 NBEAP1P0C6P0 100 aa13.48□□□□□ -0.25
SLC6A1-204ENST00000462473 HTN1P15515 57 aa13.48□□□□□ -0.25
SLC6A1-204ENST00000462473 PAXXQ9BUH6 204 aa13.48□□□□□ -0.25
SLC6A1-204ENST00000462473 PARD6GQ9BYG4 376 aaPredicted RBP13.48□□□□□ -0.25
SLC6A1-204ENST00000462473 WFDC1Q9HC57 220 aa13.48□□□□□ -0.25
SLC6A1-204ENST00000462473 NPIPB6E9PJ23 425 aa13.47□□□□□ -0.25
SLC6A1-204ENST00000462473 TAS2R60P59551 318 aa13.47□□□□□ -0.25
SLC6A1-204ENST00000462473 EXOC3-AS1Q8N2X6 119 aa13.47□□□□□ -0.25
SLC6A1-204ENST00000462473 J3KRW8 73 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 OR7C2O60412 319 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 OR10J4P0C629 311 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 AZU1P20160 251 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 LEPP41159 167 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 DAD1P61803 113 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 ICAM4Q14773 271 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 KIR3DS1Q14943 382 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 OXA1LQ15070 435 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 RNF141Q8WVD5 230 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 C20orf144Q9BQM9 153 aa13.46□□□□□ -0.25
SLC6A1-204ENST00000462473 HYDINQ4G0P3 5121 aa13.45□□□□□ -0.26
SLC6A1-204ENST00000462473 H7BYZ3 331 aa13.45□□□□□ -0.26
SLC6A1-204ENST00000462473 RGS21Q2M5E4 152 aa13.45□□□□□ -0.26
SLC6A1-204ENST00000462473 ODF3Q96PU9 254 aa13.45□□□□□ -0.26
SLC6A1-204ENST00000462473 NDUFAF3Q9BU61 184 aa13.45□□□□□ -0.26
SLC6A1-204ENST00000462473 LYRM9A8MSI8 78 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 HTN3P15516 51 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 TAS2R45P59539 299 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 ERCC8Q13216 396 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 GFI1BQ5VTD9 330 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 FAM122CQ6P4D5 195 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 FXYD5Q96DB9 178 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 C16orf74Q96GX8 76 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 LINC00477Q96M19 166 aa13.44□□□□□ -0.26
SLC6A1-204ENST00000462473 GIPP09681 153 aaPredicted RBP13.43□□□□□ -0.26
SLC6A1-204ENST00000462473 ACOT6Q3I5F7 207 aaPredicted RBP13.43□□□□□ -0.26
SLC6A1-204ENST00000462473 KHDC3LQ587J8 217 aa13.43□□□□□ -0.26
SLC6A1-204ENST00000462473 ASB13Q8WXK3 278 aa13.43□□□□□ -0.26
SLC6A1-204ENST00000462473 DEFB130BP0DP73 79 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 DEFB130AP0DP74 79 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 UBE2L3P68036 154 aaKnown RBP13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 ZNF266Q14584 549 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 Q5BKY6 102 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 ZNF493Q6ZR52 646 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 CCDC28AQ8IWP9 274 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 ZNF503Q96F45 646 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 PHYHIPLQ96FC7 376 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 AQP10Q96PS8 301 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 AGPAT4-IT1Q9H0P7 198 aa13.42□□□□□ -0.26
SLC6A1-204ENST00000462473 TRAV12-3A0A0B4J271 114 aa13.41□□□□□ -0.26
SLC6A1-204ENST00000462473 A0A1W2PPV4 95 aa13.41□□□□□ -0.26
SLC6A1-204ENST00000462473 PLAC8L1A1L4L8 177 aa13.41□□□□□ -0.26
SLC6A1-204ENST00000462473 M6PRP20645 277 aa13.41□□□□□ -0.26
SLC6A1-204ENST00000462473 RANP62826 216 aaKnown RBP13.41□□□□□ -0.26
SLC6A1-204ENST00000462473 TMEM263Q8WUH6 116 aaKnown RBP13.41□□□□□ -0.26
SLC6A1-204ENST00000462473 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 EIF3GO75821 320 aaKnown RBP eCLIP13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 SLC25A5P05141 298 aaKnown RBP13.4□□□□□ -0.26
SLC6A1-204ENST00000462473 CSN1S1P47710 185 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms