RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GCSHP23434 173 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 C4orf46Q504U0 113 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 ZNF431Q8TF32 576 aaPredicted RBP7.38□□□□□ -1.23
CBX3-205ENST00000462165 DIRAS2Q96HU8 199 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 ODF3Q96PU9 254 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 ARL6Q9H0F7 186 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 ARV1Q9H2C2 271 aa7.38□□□□□ -1.23
CBX3-205ENST00000462165 PRAC2D3DTV9 90 aa7.37□□□□□ -1.23
CBX3-205ENST00000462165 K7EPK0 472 aa7.37□□□□□ -1.23
CBX3-205ENST00000462165 ZNF324O75467 553 aaPredicted RBP7.37□□□□□ -1.23
CBX3-205ENST00000462165 Q6ZSN1 163 aa7.37□□□□□ -1.23
CBX3-205ENST00000462165 ZBTB8BQ8NAP8 495 aaPredicted RBP7.37□□□□□ -1.23
CBX3-205ENST00000462165 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
CBX3-205ENST00000462165 ICOSQ9Y6W8 199 aa7.37□□□□□ -1.23
CBX3-205ENST00000462165 FAT3Q8TDW7 4589 aa7.37□□□□□ -1.23
CBX3-205ENST00000462165 TRAV9-2A0A087WT02 112 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 LINC00854A0A1B0GVQ3 168 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 FNDC10F2Z333 226 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 J3KRW8 73 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 SLC17A3O00476 420 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 HOXB5P09067 269 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 SNRPCP09234 159 aaKnown RBP7.36□□□□□ -1.23
CBX3-205ENST00000462165 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 VAMP1P23763 118 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 LEPP41159 167 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 PXDC1Q5TGL8 231 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 LINC00305Q7Z4B0 112 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 BPIFA4PQ86YQ2 179 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 ZNF680Q8NEM1 530 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 SAT2Q96F10 170 aaPredicted RBP7.36□□□□□ -1.23
CBX3-205ENST00000462165 NPVFQ9HCQ7 196 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 RSL24D1Q9UHA3 163 aaKnown RBP7.36□□□□□ -1.23
CBX3-205ENST00000462165 FUT9Q9Y231 359 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 PXMP4Q9Y6I8 212 aa7.36□□□□□ -1.23
CBX3-205ENST00000462165 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
CBX3-205ENST00000462165 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 NPIPB6E9PJ23 425 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 K7EP13 123 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 PAX4O43316 350 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 SPINK4O60575 86 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 SFT2D2O95562 160 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 FAUP35544 74 aaKnown RBP7.35□□□□□ -1.23
CBX3-205ENST00000462165 RRAS2P62070 204 aaPredicted RBP7.35□□□□□ -1.23
CBX3-205ENST00000462165 POLR2GP62487 172 aaKnown RBP eCLIP7.35□□□□□ -1.23
CBX3-205ENST00000462165 ID3Q02535 119 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 SLC38A11Q08AI6 406 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 LYPD5Q6UWN5 251 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 LINC00467Q9BRT7 94 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 GSN-AS1Q9NRJ2 163 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 PSENENQ9NZ42 101 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 LY96Q9Y6Y9 160 aa7.35□□□□□ -1.23
CBX3-205ENST00000462165 KRTAP9-6A0A140TA67 174 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 H3BTX0 84 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 CCNKO75909 580 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 SLC25A5P05141 298 aaKnown RBP7.34□□□□□ -1.23
CBX3-205ENST00000462165 IGLC2P0DOY2 106 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 TCL1AP56279 114 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 SLAQ13239 276 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 PPP1R1AQ13522 171 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 SPCS2Q15005 226 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 ANXA2RQ3ZCQ2 193 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 EIF4E3Q8N5X7 224 aaKnown RBP7.34□□□□□ -1.23
CBX3-205ENST00000462165 ST6GAL2Q96JF0 529 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 SOSTQ9BQB4 213 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 PRO0255Q9UI72 69 aa7.34□□□□□ -1.23
CBX3-205ENST00000462165 C7orf71A4D174 169 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 GOSR2O14653 212 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 SMIM18P0DKX4 95 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 CRYBA4P53673 196 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 HAMPP81172 84 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 MRPL23Q16540 153 aaKnown RBP7.33□□□□□ -1.24
CBX3-205ENST00000462165 TMEM14EPQ6UXP3 125 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 ZNF546Q86UE3 836 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 TMEM37Q8WXS4 190 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 SMIM8Q96KF7 97 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 SLC25A21Q9BQT8 299 aaPredicted RBP7.33□□□□□ -1.24
CBX3-205ENST00000462165 MSRB1Q9NZV6 116 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 CCDC59Q9P031 241 aaKnown RBP7.33□□□□□ -1.24
CBX3-205ENST00000462165 MGAT4CQ9UBM8 478 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 KLF12Q9Y4X4 402 aa7.33□□□□□ -1.24
CBX3-205ENST00000462165 FABP12A6NFH5 140 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 KLLNB2CW77 178 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 H3BQ15 152 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 AGPAT2O15120 278 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 SSSCA1O60232 199 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 COX7A2P2O60397 106 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 METTL15P1P0C7V9 234 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 OPCMLQ14982 345 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 IBA57Q5T440 356 aaKnown RBP7.32□□□□□ -1.24
CBX3-205ENST00000462165 MORN5Q5VZ52 161 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 OR10P1Q8NGE3 313 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 VGLL1Q99990 258 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 HHLA3Q9XRX5 114 aa7.32□□□□□ -1.24
CBX3-205ENST00000462165 IGLV5-52A0A0A0MRZ9 124 aa7.31□□□□□ -1.24
CBX3-205ENST00000462165 KRTAP29-1A8MX34 341 aaPredicted RBP7.31□□□□□ -1.24
CBX3-205ENST00000462165 PRAF2O60831 178 aa7.31□□□□□ -1.24
CBX3-205ENST00000462165 ZNF253O75346 499 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms