RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 RFNGQ9Y644 331 aa12.21□□□□□ -0.45
TOP3A-202ENST00000461127 CFDP00746 253 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-202ENST00000461127 LINC00869P0C866 280 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 GATA2P23769 480 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-202ENST00000461127 CRYBB3P26998 211 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 B2MP61769 119 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
TOP3A-202ENST00000461127 SERF2P84101 59 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 FAM222AQ5U5X8 452 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 TMEM88Q6PEY1 159 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-202ENST00000461127 TMEM182Q6ZP80 229 aaPredicted RBP12.2□□□□□ -0.46
TOP3A-202ENST00000461127 Q6ZRG5 221 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 SLC39A9Q9NUM3 307 aa12.2□□□□□ -0.46
TOP3A-202ENST00000461127 IGHV3OR16-12A0A075B7B8 117 aa12.19□□□□□ -0.46
TOP3A-202ENST00000461127 ZNF705FA8MVS1 300 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-202ENST00000461127 IFNA7P01567 189 aa12.19□□□□□ -0.46
TOP3A-202ENST00000461127 ZNF705DP0CH99 300 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-202ENST00000461127 ZNF705BP0CI00 300 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-202ENST00000461127 PSG1P11464 419 aa12.19□□□□□ -0.46
TOP3A-202ENST00000461127 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
TOP3A-202ENST00000461127 ALKAL2Q6UX46 152 aa12.19□□□□□ -0.46
TOP3A-202ENST00000461127 OR51G1Q8NGK1 321 aa12.19□□□□□ -0.46
TOP3A-202ENST00000461127 COX7A2P2O60397 106 aa12.18□□□□□ -0.46
TOP3A-202ENST00000461127 MBP02144 154 aa12.18□□□□□ -0.46
TOP3A-202ENST00000461127 INAFM2P0DMQ5 153 aa12.18□□□□□ -0.46
TOP3A-202ENST00000461127 LYZP61626 148 aa12.18□□□□□ -0.46
TOP3A-202ENST00000461127 ACOT6Q3I5F7 207 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-202ENST00000461127 TEX261Q6UWH6 196 aa12.18□□□□□ -0.46
TOP3A-202ENST00000461127 PBDC1Q9BVG4 233 aa12.18□□□□□ -0.46
TOP3A-202ENST00000461127 UMAD1C9J7I0 102 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 H3BMM0 161 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 IL4P05112 153 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 ORM2P19652 201 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 PXDC1Q5TGL8 231 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 RNF125Q96EQ8 232 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 DOK5Q9P104 306 aa12.17□□□□□ -0.46
TOP3A-202ENST00000461127 HYPMO75409 117 aa12.16□□□□□ -0.46
TOP3A-202ENST00000461127 OR5G3P0C626 314 aa12.16□□□□□ -0.46
TOP3A-202ENST00000461127 RAB2AP61019 212 aa12.16□□□□□ -0.46
TOP3A-202ENST00000461127 ZNF680Q8NEM1 530 aa12.16□□□□□ -0.46
TOP3A-202ENST00000461127 PFDN5Q99471 154 aa12.16□□□□□ -0.46
TOP3A-202ENST00000461127 DNAH5Q8TE73 4624 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 M6PRP20645 277 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 RAB5CP51148 216 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 DAD1P61803 113 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 GCSAMLQ5JQS6 135 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 FAM74A1Q5RGS3 127 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 C10orf113Q5VZT2 155 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 OR10G4Q8NGN3 311 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 SEPSECSQ9HD40 501 aaKnown RBP12.15□□□□□ -0.46
TOP3A-202ENST00000461127 HIGD1AQ9Y241 93 aa12.15□□□□□ -0.46
TOP3A-202ENST00000461127 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 S100A7P31151 101 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 SULT1A2P50226 295 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 FAM122CQ6P4D5 195 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 FAM213BQ8TBF2 198 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 RNF141Q8WVD5 230 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
TOP3A-202ENST00000461127 A0A1W2PPV4 95 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 HBE1P02100 147 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 PLP1P60201 277 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 RHOBP62745 196 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 DPPA3Q6W0C5 159 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-202ENST00000461127 RPRMQ9NS64 109 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 PFDN2Q9UHV9 154 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 GOLT1BQ9Y3E0 138 aa12.13□□□□□ -0.47
TOP3A-202ENST00000461127 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
TOP3A-202ENST00000461127 LOC102723971A0A1B0GUV8 181 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 CCL18P55774 89 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 FXYD7P58549 80 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 IFITM2Q01629 132 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 USF2Q15853 346 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-202ENST00000461127 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 GLMPQ8WWB7 406 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 NRN1Q9NPD7 142 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 U3KQE9 123 aa12.12□□□□□ -0.47
TOP3A-202ENST00000461127 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 CDC34P49427 236 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-202ENST00000461127 RAB14P61106 215 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 PATE2Q6UY27 113 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 LINC00305Q7Z4B0 112 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 LRRC20Q8TCA0 184 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 TMEM37Q8WXS4 190 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
TOP3A-202ENST00000461127 SLC25A22Q9H936 323 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 FUT9Q9Y231 359 aa12.11□□□□□ -0.47
TOP3A-202ENST00000461127 FHITP49789 147 aa12.1□□□□□ -0.47
TOP3A-202ENST00000461127 RRN3P1Q2M238 152 aa12.1□□□□□ -0.47
TOP3A-202ENST00000461127 UHRF2Q96PU4 802 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms