RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ABCA13Q86UQ4 5058 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 TRBV19A0A075B6N1 114 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 TCTAP57738 103 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 RHOBP62745 196 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 PDE6HQ13956 83 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 FCN2Q15485 313 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 FAM167A-AS1Q96KT0 104 aa13.17□□□□□ -0.3
COL9A2-205ENST00000461118 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
COL9A2-205ENST00000461118 PRAC2D3DTV9 90 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 INSP01308 110 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 IFNA5P01569 189 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 HBE1P02100 147 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 C12orf74Q32Q52 190 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 Q6ZTC4 211 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 SLC25A2Q9BXI2 301 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 MRPL32Q9BYC8 188 aaKnown RBP13.16□□□□□ -0.3
COL9A2-205ENST00000461118 PPP1R14DQ9NXH3 145 aa13.16□□□□□ -0.3
COL9A2-205ENST00000461118 TRAV10A0A0B4J240 114 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 NDUFB4O95168 129 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 SPART-AS1P0CW21 52 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 RRN3P1Q2M238 152 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 SCGB1C1Q8TD33 95 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 ASB13Q8WXK3 278 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 MRPL53Q96EL3 112 aaKnown RBP13.15□□□□□ -0.3
COL9A2-205ENST00000461118 TMEM208Q9BTX3 173 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 APLNQ9ULZ1 77 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 MUC4Q99102 2169 aa13.15□□□□□ -0.3
COL9A2-205ENST00000461118 TEX48A0A1B0GUV7 120 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 PYYP10082 97 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 CDKN1BP46527 198 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 BAP18Q8IXM2 172 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 SMIM3Q9BZL3 60 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 WFDC1Q9HC57 220 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 FUT9Q9Y231 359 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 PRELID1Q9Y255 219 aa13.14□□□□□ -0.31
COL9A2-205ENST00000461118 DYNC1H1Q14204 4646 aaKnown RBP13.13□□□□□ -0.31
COL9A2-205ENST00000461118 PKD1P98161 4303 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 LOC102723971A0A1B0GUV8 181 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 PRB4P10163 310 aaPredicted RBP13.13□□□□□ -0.31
COL9A2-205ENST00000461118 EMP1P54849 157 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 TMEM256Q8N2U0 113 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 OR51M1Q9H341 326 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 DKK2Q9UBU2 259 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
COL9A2-205ENST00000461118 A0A1B0GVY2 172 aa13.12□□□□□ -0.31
COL9A2-205ENST00000461118 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
COL9A2-205ENST00000461118 GIPP09681 153 aaPredicted RBP13.12□□□□□ -0.31
COL9A2-205ENST00000461118 NBEAP1P0C6P0 100 aa13.12□□□□□ -0.31
COL9A2-205ENST00000461118 TSPOP30536 169 aa13.12□□□□□ -0.31
COL9A2-205ENST00000461118 FFAR4Q5NUL3 377 aa13.12□□□□□ -0.31
COL9A2-205ENST00000461118 IGLL5B9A064 214 aa13.11□□□□□ -0.31
COL9A2-205ENST00000461118 OXA1LQ15070 435 aa13.11□□□□□ -0.31
COL9A2-205ENST00000461118 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
COL9A2-205ENST00000461118 AQP10Q96PS8 301 aa13.11□□□□□ -0.31
COL9A2-205ENST00000461118 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
COL9A2-205ENST00000461118 C20orf144Q9BQM9 153 aa13.11□□□□□ -0.31
COL9A2-205ENST00000461118 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
COL9A2-205ENST00000461118 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-205ENST00000461118 M0R3E3 92 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 Q5BKY6 102 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 BLNKQ8WV28 456 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 FXYD5Q96DB9 178 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 AAMDCQ9H7C9 122 aa13.1□□□□□ -0.31
COL9A2-205ENST00000461118 DEFB131BA0A096LNP1 70 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 TAS2R60P59551 318 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 EXOC3-AS1Q8N2X6 119 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 ZNF503Q96F45 646 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 LINC01587Q99440 93 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 DNAH11Q96DT5 4516 aa13.09□□□□□ -0.31
COL9A2-205ENST00000461118 PRM2P04554 102 aa13.08□□□□□ -0.32
COL9A2-205ENST00000461118 ZNF266Q14584 549 aa13.08□□□□□ -0.32
COL9A2-205ENST00000461118 LINC00477Q96M19 166 aa13.08□□□□□ -0.32
COL9A2-205ENST00000461118 IGHV4-4A0A075B6R2 117 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 H7BYZ3 331 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 OR7C2O60412 319 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 OR10J4P0C629 311 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 AZU1P20160 251 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 M6PRP20645 277 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 LEPP41159 167 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 TAS2R45P59539 299 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 ICAM4Q14773 271 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
COL9A2-205ENST00000461118 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
COL9A2-205ENST00000461118 PLAC8L1A1L4L8 177 aa13.06□□□□□ -0.32
COL9A2-205ENST00000461118 LYRM9A8MSI8 78 aa13.06□□□□□ -0.32
COL9A2-205ENST00000461118 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms