RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 PRB4P10163 310 aaPredicted RBP14.05□□□□□ -0.16
CHRD-208ENST00000460627 LINC00518Q8N0U6 118 aa14.05□□□□□ -0.16
CHRD-208ENST00000460627 TMEM14CQ9P0S9 112 aa14.05□□□□□ -0.16
CHRD-208ENST00000460627 PRR14LQ5THK1 2151 aa14.05□□□□□ -0.16
CHRD-208ENST00000460627 COLCA2A8K830 154 aa14.05□□□□□ -0.16
CHRD-208ENST00000460627 AMBPP02760 352 aa14.04□□□□□ -0.16
CHRD-208ENST00000460627 DDTP30046 118 aa14.04□□□□□ -0.16
CHRD-208ENST00000460627 CHCHD1Q96BP2 118 aaKnown RBP14.04□□□□□ -0.16
CHRD-208ENST00000460627 COTL1Q14019 142 aa14.04□□□□□ -0.16
CHRD-208ENST00000460627 VCX2Q9H322 139 aa14.04□□□□□ -0.16
CHRD-208ENST00000460627 JKAMPQ9P055 326 aa14.04□□□□□ -0.16
CHRD-208ENST00000460627 DMRT1Q9Y5R6 373 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 SONP18583 2426 aaKnown RBP14.03□□□□□ -0.16
CHRD-208ENST00000460627 TRAV8-6A0A0B4J262 113 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 H3BRN7 92 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 IGHV4-59P01825 116 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 CXCL1P09341 107 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 DNLZQ5SXM8 178 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 TMEM75Q8N9X5 138 aa14.03□□□□□ -0.16
CHRD-208ENST00000460627 CCDC168Q8NDH2 2452 aa14.02□□□□□ -0.16
CHRD-208ENST00000460627 HINT1P49773 126 aaPredicted RBP14.02□□□□□ -0.16
CHRD-208ENST00000460627 DPH3P1Q9H4G8 78 aa14.02□□□□□ -0.16
CHRD-208ENST00000460627 MRPL27Q9P0M9 148 aaKnown RBP14.02□□□□□ -0.16
CHRD-208ENST00000460627 NUP35Q8NFH5 326 aa14.02□□□□□ -0.16
CHRD-208ENST00000460627 LINC00479Q96M42 142 aa14.02□□□□□ -0.16
CHRD-208ENST00000460627 PIEZO2Q9H5I5 2752 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 LINC01559Q495D7 138 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 PRR20EP86478 221 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 PRR20CP86479 221 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 PRR20DP86480 221 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 PRR20BP86481 221 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 PRR20AP86496 221 aa14.02□□□□□ -0.17
CHRD-208ENST00000460627 RPL35AP18077 110 aaKnown RBP14.01□□□□□ -0.17
CHRD-208ENST00000460627 TCTEX1D4Q5JR98 221 aa14.01□□□□□ -0.17
CHRD-208ENST00000460627 ZNF492Q9P255 531 aa14.01□□□□□ -0.17
CHRD-208ENST00000460627 IL17RELQ6ZVW7 336 aa14.01□□□□□ -0.17
CHRD-208ENST00000460627 TCF21O43680 179 aa14.01□□□□□ -0.17
CHRD-208ENST00000460627 NPBQ8NG41 125 aa14.01□□□□□ -0.17
CHRD-208ENST00000460627 FNDC4Q9H6D8 234 aaPredicted RBP14.01□□□□□ -0.17
CHRD-208ENST00000460627 PRADC1Q9BSG0 188 aa14□□□□□ -0.17
CHRD-208ENST00000460627 SLC25A2Q9BXI2 301 aa14□□□□□ -0.17
CHRD-208ENST00000460627 MED12LQ86YW9 2145 aa14□□□□□ -0.17
CHRD-208ENST00000460627 IGLV1-47P01700 117 aa14□□□□□ -0.17
CHRD-208ENST00000460627 NIT1Q86X76 327 aa14□□□□□ -0.17
CHRD-208ENST00000460627 TRGV1A0A0A0MS02 117 aa14□□□□□ -0.17
CHRD-208ENST00000460627 FAM231BA6NCW3 169 aa14□□□□□ -0.17
CHRD-208ENST00000460627 RPL36AP83881 106 aaKnown RBP14□□□□□ -0.17
CHRD-208ENST00000460627 C8orf86Q6ZUL3 223 aa14□□□□□ -0.17
CHRD-208ENST00000460627 RPL36ALQ969Q0 106 aaKnown RBP14□□□□□ -0.17
CHRD-208ENST00000460627 GFRA4Q9GZZ7 299 aa14□□□□□ -0.17
CHRD-208ENST00000460627 EVI2AP22794 236 aa13.99□□□□□ -0.17
CHRD-208ENST00000460627 RPL24P83731 157 aaKnown RBP13.99□□□□□ -0.17
CHRD-208ENST00000460627 ZNF726P1Q15940 193 aa13.99□□□□□ -0.17
CHRD-208ENST00000460627 ZNF491Q8N8L2 437 aa13.99□□□□□ -0.17
CHRD-208ENST00000460627 PCNX3Q9H6A9 2034 aa13.99□□□□□ -0.17
CHRD-208ENST00000460627 ERCC8Q13216 396 aa13.99□□□□□ -0.17
CHRD-208ENST00000460627 CT83Q5H943 113 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 IGHV4-38-2P0DP08 117 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 UBE2E2Q96LR5 201 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 D6R8Y8 96 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 GGTLC3B5MD39 225 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 FXYD7P58549 80 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 IFI27L1Q96BM0 104 aa13.98□□□□□ -0.17
CHRD-208ENST00000460627 MRAP2Q96G30 205 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 IGHV7-81A0A0B4J1V7 117 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 LOC107984156A0A0G2JMH3 177 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 ARL17AQ8IVW1 177 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 RNF182Q8N6D2 247 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 IGHV7-4-1A0A0J9YVY3 117 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 FABP2P12104 132 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 VWC2Q2TAL6 325 aa13.97□□□□□ -0.17
CHRD-208ENST00000460627 C9JQL5 133 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 ARMS2P0C7Q2 107 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 CHCHD5Q9BSY4 110 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 PFN1P07737 140 aaKnown RBP13.96□□□□□ -0.17
CHRD-208ENST00000460627 ADCYAP1P18509 176 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 Q71RC1 249 aaPredicted RBP13.96□□□□□ -0.17
CHRD-208ENST00000460627 ZNF114Q8NC26 417 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 H7C2G1 150 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 NCR2O95944 276 aa13.96□□□□□ -0.17
CHRD-208ENST00000460627 MRPS16Q9Y3D3 137 aaKnown RBP13.96□□□□□ -0.17
CHRD-208ENST00000460627 MYO18BQ8IUG5 2567 aa13.96□□□□□ -0.18
CHRD-208ENST00000460627 NRGNQ92686 78 aa13.96□□□□□ -0.18
CHRD-208ENST00000460627 ZNF876PQ49A33 203 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 MCRIP2Q9BUT9 160 aaKnown RBP13.95□□□□□ -0.18
CHRD-208ENST00000460627 VCYO14598 125 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 DPM2O94777 84 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 LAGE3Q14657 143 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 TOMM7Q9P0U1 55 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 C11orf52Q96A22 123 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 LSM4Q9Y4Z0 139 aaKnown RBP13.95□□□□□ -0.18
CHRD-208ENST00000460627 CD28P10747 220 aa13.95□□□□□ -0.18
CHRD-208ENST00000460627 C14orf178Q8N769 122 aaPredicted RBP13.95□□□□□ -0.18
CHRD-208ENST00000460627 PRR25Q96S07 402 aa13.94□□□□□ -0.18
CHRD-208ENST00000460627 LAMTOR2Q9Y2Q5 125 aa13.94□□□□□ -0.18
CHRD-208ENST00000460627 ZFP36P26651 326 aaKnown RBP13.94□□□□□ -0.18
CHRD-208ENST00000460627 C14orf144Q96I85 54 aa13.94□□□□□ -0.18
CHRD-208ENST00000460627 NDUFA3O95167 84 aa13.93□□□□□ -0.18
CHRD-208ENST00000460627 Q8N7P7 452 aa13.93□□□□□ -0.18
CHRD-208ENST00000460627 FXYD5Q96DB9 178 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms