RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 ADGRL2O95490 1459 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 NCAPD3P42695 1498 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 MAGI1Q96QZ7 1491 aaPredicted RBP2.42□□□□□ -2.02
CCDC50-203ENST00000460064 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 IGHV3-73A0A0B4J1V6 119 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 C19orf71A6NCJ1 209 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 SPINK8P0C7L1 97 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 PYYP10082 97 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 HIST1H4AP62805 103 aaKnown RBP2.42□□□□□ -2.02
CCDC50-203ENST00000460064 PATE2Q6UY27 113 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 SOSTDC1Q6X4U4 206 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 HIST3H2BBQ8N257 126 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 CNEP1R1Q8N9A8 125 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 PRELID3AQ96N28 172 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 HIST1H2BLQ99880 126 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 PRO1933Q9H354 126 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 Q9H521 79 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 LSM2Q9Y333 95 aaKnown RBP2.42□□□□□ -2.02
CCDC50-203ENST00000460064 WNK3Q9BYP7 1800 aa2.42□□□□□ -2.02
CCDC50-203ENST00000460064 CCDC18Q5T9S5 1454 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 FANCMQ8IYD8 2048 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 MYH7BA7E2Y1 1941 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 TRAV12-2A0A075B6T6 113 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 MDFIC2A0A1B0GVS7 189 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 ODF3BA8MYP8 253 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 IGHV1-69P01742 117 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 IGHV3-7P01780 117 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 HBDP02042 147 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 TRGC1P0CF51 173 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 FXYD7P58549 80 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 TMEM155Q4W5P6 130 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 C7orf65Q6ZTY9 151 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 MIR17HGQ75NE6 70 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 TTC9CQ8N5M4 171 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 OR4B1Q8NGF8 309 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 CLDND2Q8NHS1 167 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 SEC11CQ9BY50 192 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 AGPAT4-IT1Q9H0P7 198 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 TXNL4BQ9NX01 149 aaKnown RBP2.41□□□□□ -2.02
CCDC50-203ENST00000460064 TROQ12816 1431 aaPredicted RBP2.41□□□□□ -2.02
CCDC50-203ENST00000460064 N4BP2Q86UW6 1770 aaPredicted RBP2.41□□□□□ -2.02
CCDC50-203ENST00000460064 CUL7Q14999 1698 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 QRICH2Q9H0J4 1663 aa2.41□□□□□ -2.02
CCDC50-203ENST00000460064 NCKAP5O14513 1909 aa2.4□□□□□ -2.02
CCDC50-203ENST00000460064 MED1Q15648 1581 aaPredicted RBP2.4□□□□□ -2.02
CCDC50-203ENST00000460064 KIAA1551Q9HCM1 1747 aa2.4□□□□□ -2.02
CCDC50-203ENST00000460064 EML6Q6ZMW3 1958 aa2.4□□□□□ -2.02
CCDC50-203ENST00000460064 MYO16Q9Y6X6 1858 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 TRGV10A0A0A0MS01 117 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 GEMIN2O14893 280 aaKnown RBP2.4□□□□□ -2.03
CCDC50-203ENST00000460064 MT-ND6P03923 174 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 CTSDP07339 412 aaPredicted RBP2.4□□□□□ -2.03
CCDC50-203ENST00000460064 CLLU1Q5K131 121 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 EIF5AL1Q6IS14 154 aaKnown RBP2.4□□□□□ -2.03
CCDC50-203ENST00000460064 MRPL54Q6P161 138 aaKnown RBP2.4□□□□□ -2.03
CCDC50-203ENST00000460064 ZNF705AQ6ZN79 300 aaPredicted RBP2.4□□□□□ -2.03
CCDC50-203ENST00000460064 ATOH7Q8N100 152 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 Q8N2B8 174 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 SIGLECL1Q8N7X8 197 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 OR5D16Q8NGK9 328 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 PFN4Q8NHR9 129 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 ZNF714Q96N38 554 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 CCL26Q9Y258 94 aa2.4□□□□□ -2.03
CCDC50-203ENST00000460064 CHCHD2Q9Y6H1 151 aaPredicted RBP2.4□□□□□ -2.03
CCDC50-203ENST00000460064 TRPM6Q9BX84 2022 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 TRBV20-1A0A075B6N2 111 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 TRGV4A0A0C4DH28 118 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 PNMA8CA0A1B0GUJ8 204 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 GRIFINA4D1Z8 144 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 C17orf51A8MQB3 221 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 RER1O15258 196 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 OR1I1O60431 355 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 CD3DP04234 171 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 IFITM1P13164 125 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 ZNF90Q03938 601 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 KCNRGQ8N5I3 272 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
CCDC50-203ENST00000460064 SLC35B3Q9H1N7 401 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 SIPA1L1O43166 1804 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 ECM29Q5VYK3 1845 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 PHIPQ8WWQ0 1821 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 KDM5CP41229 1560 aa2.39□□□□□ -2.03
CCDC50-203ENST00000460064 THOC2Q8NI27 1593 aaKnown RBP2.39□□□□□ -2.03
CCDC50-203ENST00000460064 AKAP11Q9UKA4 1901 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 TOPBP1Q92547 1522 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 DLC1Q96QB1 1528 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 KDM5AP29375 1690 aaKnown RBP2.38□□□□□ -2.03
CCDC50-203ENST00000460064 H3BT86 120 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 UBA52P62987 128 aaKnown RBP2.38□□□□□ -2.03
CCDC50-203ENST00000460064 DYNLT1P63172 113 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 SUPT4H1P63272 117 aaKnown RBP2.38□□□□□ -2.03
CCDC50-203ENST00000460064 AKR1C1Q04828 323 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 Q56UQ5 140 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 BCORL1Q5H9F3 1711 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 Q6ZUT4 128 aa2.38□□□□□ -2.03
CCDC50-203ENST00000460064 SMCR5Q8TEV8 140 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms