RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 H3BQ15 152 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 H3BTX0 84 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 TAS2R30P59541 319 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 MORN5Q5VZ52 161 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 Q6ZTI0 123 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 GGACTQ9BVM4 153 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 DNAJC4Q9NNZ3 241 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 FLVCR2Q9UPI3 526 aa8.48□□□□□ -1.05
GPNMB-204ENST00000459927 A0A096LPF7 62 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 J3KRW8 73 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 SLC17A3O00476 420 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 TSC22D2O75157 780 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 NDUFB6O95139 128 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 OR4E1P0C645 316 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 IGLC2P0DOY2 106 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 OPCMLQ14982 345 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
GPNMB-204ENST00000459927 TRAV5A0A0B4J249 113 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 LINC00854A0A1B0GVQ3 168 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 C7orf66A4D0T2 115 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 ZNF324O75467 553 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-204ENST00000459927 S100A5P33763 92 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 LEPP41159 167 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 C10orf113Q5VZT2 155 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
GPNMB-204ENST00000459927 ZNF546Q86UE3 836 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 C18orf15Q96N68 181 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 ODF3Q96PU9 254 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 MGST2Q99735 147 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 GSN-AS1Q9NRJ2 163 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 GSKIPQ9P0R6 139 aa8.46□□□□□ -1.06
GPNMB-204ENST00000459927 NAP1L6A6NFF2 107 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 NPIPB6E9PJ23 425 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 SIVA1O15304 175 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 COX7A2P2O60397 106 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 NOL3O60936 208 aaKnown RBP8.45□□□□□ -1.06
GPNMB-204ENST00000459927 XGP55808 180 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 LINC00315P59091 139 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 GUK1Q16774 197 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 IAH1Q2TAA2 248 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-204ENST00000459927 Q6ZRG5 221 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 LYPD1Q8N2G4 141 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
GPNMB-204ENST00000459927 FAT1Q14517 4588 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 SCGB1D2O95969 90 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 MBPP02686 304 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-204ENST00000459927 SLC25A5P05141 298 aaKnown RBP8.44□□□□□ -1.06
GPNMB-204ENST00000459927 BAK1Q16611 211 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
GPNMB-204ENST00000459927 RCL1Q9Y2P8 373 aaKnown RBP8.44□□□□□ -1.06
GPNMB-204ENST00000459927 INAFM2P0DMQ5 153 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
GPNMB-204ENST00000459927 CAMLGP49069 296 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 ERCC8Q13216 396 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 RAB31Q13636 194 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 ANXA2RQ3ZCQ2 193 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 MIC13Q5XKP0 118 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 NRARPQ7Z6K4 114 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 AGPAT4-IT1Q9H0P7 198 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 FUT9Q9Y231 359 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 KLF12Q9Y4X4 402 aa8.43□□□□□ -1.06
GPNMB-204ENST00000459927 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 C7orf71A4D174 169 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 KLLNB2CW77 178 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 PAX4O43316 350 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 SPINK4O60575 86 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 ZNF253O75346 499 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 RNASE4P34096 147 aaKnown RBP8.42□□□□□ -1.06
GPNMB-204ENST00000459927 CD300CQ08708 224 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 LYPD5Q6UWN5 251 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
GPNMB-204ENST00000459927 MITD1Q8WV92 249 aa8.42□□□□□ -1.06
GPNMB-204ENST00000459927 TRBV19A0A075B6N1 114 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 M0R3E3 92 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 EREGO14944 169 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 NXPH4O95158 308 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 NDUFB4O95168 129 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 RPL29P47914 159 aaKnown RBP8.41□□□□□ -1.06
GPNMB-204ENST00000459927 INPP1P49441 399 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 SPANXN2Q5MJ10 180 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 C12orf45Q8N5I9 185 aaPredicted RBP8.41□□□□□ -1.06
GPNMB-204ENST00000459927 ZNF680Q8NEM1 530 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 OR1L4Q8NGR5 311 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 C20orf85Q9H1P6 137 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 HHLA3Q9XRX5 114 aa8.41□□□□□ -1.06
GPNMB-204ENST00000459927 FAM24AA6NFZ4 105 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 L7N2F9 121 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 PRAF2O60831 178 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 MPDU1O75352 247 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 GPX1P07203 203 aa8.4□□□□□ -1.06
GPNMB-204ENST00000459927 HIST1H1EP10412 219 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms