RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CRYGSP22914 178 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 DSCR8Q96T75 97 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 CHAC1Q9BUX1 264 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 A0A087WWC5 75 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 PATJQ8NI35 1801 aa12.93□□□□□ -0.34
HDAC7-217ENST00000459625 F8W735 103 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-217ENST00000459625 TEX36Q5VZQ5 186 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 Q6ZS92 163 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 SMPXQ9UHP9 88 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 FAM186AA6NE01 2351 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-217ENST00000459625 I3L3M4 83 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 DUX4L9Q6RFH8 374 aaPredicted RBP12.92□□□□□ -0.34
HDAC7-217ENST00000459625 A0A1B0GUS0 222 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 FAM90A9PA6NNJ1 464 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 GATA3P23771 443 aa12.92□□□□□ -0.34
HDAC7-217ENST00000459625 IGLV10-54A0A075B6I4 117 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 IGHV2-70DA0A0C4DH43 119 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 ZC2HC1BQ5TFG8 222 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 COL18A1P39060 1754 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 FLVCR1-AS1Q8TAF5 88 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 ASPHD1Q5U4P2 390 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 APRG1Q8IVJ8 170 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 STPG4Q8N801 248 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 FBLIM1Q8WUP2 373 aa12.91□□□□□ -0.34
HDAC7-217ENST00000459625 CHKB-CPT1BH3BT56 60 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 RNF5Q99942 180 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 KLHDC3Q9BQ90 382 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 LMO1P25800 156 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 IFITM2Q01629 132 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 RNF144BQ7Z419 303 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 NRGNQ92686 78 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 BUB3O43684 328 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
HDAC7-217ENST00000459625 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-217ENST00000459625 H0YIZ8 118 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 TIRAPP58753 221 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 PIFOQ8TCI5 191 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 PTPRFP10586 1907 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 CARHSP1Q9Y2V2 147 aaKnown RBP12.89□□□□□ -0.35
HDAC7-217ENST00000459625 IGLV3-32A0A0A0MS00 114 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 LRCOL1A6NCL2 159 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
HDAC7-217ENST00000459625 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 CXCL1P09341 107 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 ID3Q02535 119 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 C8orf86Q6ZUL3 223 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 CCL24O00175 119 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 C4orf48Q5BLP8 95 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 DEFB4AO15263 64 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
HDAC7-217ENST00000459625 GTSF1LQ9H1H1 148 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 IGHV4-59P01825 116 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 AMBPP02760 352 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 LAIR2Q6ISS4 152 aa12.88□□□□□ -0.35
HDAC7-217ENST00000459625 SPTBN1Q01082 2364 aaKnown RBP12.88□□□□□ -0.35
HDAC7-217ENST00000459625 GTF3C1Q12789 2109 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 TSSC4Q9Y5U2 329 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-217ENST00000459625 DOCK4Q8N1I0 1966 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 PARP14Q460N5 1801 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 TET1Q8NFU7 2136 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 CDKN1BP46527 198 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 SPTBN2O15020 2390 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 IGHG4P01861 327 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 SPRY2O43597 315 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 NDUFS7O75251 213 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 Q6P435 159 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 Q86TA4 180 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 ARTNQ5T4W7 220 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 C1orf43Q9BWL3 253 aa12.86□□□□□ -0.35
HDAC7-217ENST00000459625 CACNA1EQ15878 2313 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 CCL18P55774 89 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 SCN5AQ14524 2016 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 F6UB75 175 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 RHODO00212 210 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 SLURP1P55000 103 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 BAALCQ8WXS3 180 aa12.85□□□□□ -0.35
HDAC7-217ENST00000459625 PSME4Q14997 1843 aa12.84□□□□□ -0.35
HDAC7-217ENST00000459625 LRRK1Q38SD2 2015 aa12.84□□□□□ -0.35
HDAC7-217ENST00000459625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-217ENST00000459625 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms